Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3647 |
Symbol | |
ID | 4458037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4453516 |
End bp | 4454958 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639704419 |
Product | peptidase M48, Ste24p |
Protein accession | YP_847752 |
Protein GI | 116751065 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00143596 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.526227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAC TGACCAGAGC CGCACGGGTG TGTCTCGTGA TCGCAACCGT GGTTTGTTTC ACCTTCACGA ATGCGGTGGC GCCGCTCTCC CGAAGCTTCG CCTTCACGCT CAGCGAAGAG AACGAACTGG GGCGAAAGCT TCTCGAAAAG ATCAGGCAGC ACATGCAACT GGTCGAGGAC GGCGAAGTGC TCACGTACGT GCAGTCCGTG GGGAACCGGA TCGTCGAGCA TCTGGGGACC ACTCCCTACG AATTCCGGTT CTTCGTCATC AATGAACCGG TGCCCAACGC GTTCGCTATC CCCGGCGGTT ACGTTTTCGT CTTTCGGGGA CTCATCGAAG TGCTGGAAGA CGAAGGGGAG TTGGCCTCCA TTCTGAGTCA TGAGTTGGCT CACGTGCAGG CACGTCACAT CGAACGCCGG ATGAAGGAAG GCCGCATCCT GTCGGTTGCC TCGCTGGCGG GATTGTTGGC CGGGATTCTG CTTGCCAGCA AGACCGGTGC GAGCCCCGCC CTGGCTCTCG GAGGTGCCGC GGGCGCTCAG AGCGCCGCCT TGAAATACAG CCGCGAATTC GAAACCGAGG CGGACCAGAT CGGGCTGAGA AACCTGTGCG AGGCGGGGTA CGACCCGAAG GACATGGCTG AAGCGATGCA ACGGCTCGAG CAGTTCAGAT TTCTGAACAA CGCAAGGATA CCGAGTTACC TGTCTACGCA CCCCGCTGTG GCGGAGCGGG TCCAGTACCT GAAAGAGCTG GCGTACTCTC ACAAGGAATG GTTCGGGAAG AAGAGGGTGT CGCCCACCGC GATGGATTTC CCGCTCATGA AGGCGGCGCT CATTGCCGAT TACTCAGAGC CTGCACGAGC CATGGAACGG TTCACGGCCG GGGTCAAGAA AAGAGAGGCG GAAGCCTTCT ACGGCATGGG AAGGCTTTAC ATGCGGCAGG GAGACAACGC ACAGGCCCTG TCCATGCTGC AGGAAGCGGT CAGGCTTCGG CCGGGCAGCC CGTTCATCCT GAGCAGCCTC GGCAAGGTGT ATCACCAGCT GGGGAGGCTT CCCGAGGCGC AGAAAGCGCT TCAGACCGCC CTGTTGATGG ATTCTTCGAC GATCATCGCT CAATACAGGC TGGCGCTTGT CCTCCAGGAC CAGGGGAAGC GGGAGGAGGC CCTGGAGCAC CTTCAGAGCA TTCAGAGATA TGCCCTGTCT TTTCCCGATA TCGACTACCA GATGGGGATC ATTCTGGGGC AAAACAACCG CATCGGACTG GCTCACTACC ATCTGGGGCA CTATTACGAA AGCAAGCAGG ACCTGAAGCT GGCCTTGTTC CACTACCAGA AGGCCCGAGT GCTGCTCAGG GATTCGGTTG AAAAGATGAA TGAGCTGGAC AAGACCATCA AAGTGCTTGA GAAGGAGAAG AAGGAGAGCG TGTCACATCA GGCCCGCCGG TAA
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Protein sequence | MKPLTRAARV CLVIATVVCF TFTNAVAPLS RSFAFTLSEE NELGRKLLEK IRQHMQLVED GEVLTYVQSV GNRIVEHLGT TPYEFRFFVI NEPVPNAFAI PGGYVFVFRG LIEVLEDEGE LASILSHELA HVQARHIERR MKEGRILSVA SLAGLLAGIL LASKTGASPA LALGGAAGAQ SAALKYSREF ETEADQIGLR NLCEAGYDPK DMAEAMQRLE QFRFLNNARI PSYLSTHPAV AERVQYLKEL AYSHKEWFGK KRVSPTAMDF PLMKAALIAD YSEPARAMER FTAGVKKREA EAFYGMGRLY MRQGDNAQAL SMLQEAVRLR PGSPFILSSL GKVYHQLGRL PEAQKALQTA LLMDSSTIIA QYRLALVLQD QGKREEALEH LQSIQRYALS FPDIDYQMGI ILGQNNRIGL AHYHLGHYYE SKQDLKLALF HYQKARVLLR DSVEKMNELD KTIKVLEKEK KESVSHQARR
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