Gene Sfum_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3646 
Symbol 
ID4458036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4453067 
End bp4453519 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content53% 
IMG OID639704418 
Productiojap-like protein 
Protein accessionYP_847751 
Protein GI116751064 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000675973 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.475596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC CTAAGAAAAA AACAGCACTT TCCGGAGGGA TCGGATCCGT TTCCGAAAAG 
AAGCCGATGG ACTCGAAGAG CAAAGCCTTC CTTTGTGCGG AGGAAGCGGA CAAGCTCAAA
GCCGCCGACG TGGTGTTGCT CGAGGTGTCG AAGTATTCTT CTTTTGCCGA TTATTTCGTC
ATCTGCAGTG GAAAGTCCGG CCGCCAGGTA CAGGGGATCG CCGACAGTAT CGAACGGAGT
CTCAAAGAAG CGGGGATCAG GCCTCTGGGA GTCGAAGGCC TTCGAGAAGG TCAATGGGTA
TTGATGGACT ACGGCGACGT GATCGTCCAT GTTTTCTATG AACCCGTTCG ATTTTTCTAC
GACCTGGAGA GCCTTTGGTC TGAAGCCGAG ACGGTGCGCT GGAACGAACG ATCGGATCGA
GCCGATGCCG TGAAGGCGGA GGAATTCTTA TGA
 
Protein sequence
MTQPKKKTAL SGGIGSVSEK KPMDSKSKAF LCAEEADKLK AADVVLLEVS KYSSFADYFV 
ICSGKSGRQV QGIADSIERS LKEAGIRPLG VEGLREGQWV LMDYGDVIVH VFYEPVRFFY
DLESLWSEAE TVRWNERSDR ADAVKAEEFL