Gene Sfum_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3643 
Symbol 
ID4458033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4449926 
End bp4451104 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content62% 
IMG OID639704415 
Productglutamate 5-kinase 
Protein accessionYP_847748 
Protein GI116751061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR00451] uncharacterized domain 2
[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.423729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.526227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATT TGCAGGATCG CAAAAAGTTT TTCAGCCGCT GCCGCCGGGT GGTGATCAAG 
GTCGGCAGTG CCGTGTTGAC CGGGCCCCGG GGGTTGAACC GGGTGATGAT CCATCGGCTG
AGCGACCAGA TTGCCGAGTT CCTGGAGCGG GAACGCGGCC GGGAGGTGGT GATCGTCACT
TCCGGGGCGG TTGCGTCCGG CATTCGCAAG ATCGGGCTCA GCGAACGGCC CCGGACCATT
CCGCACAAGC AGGCGACGGC GGCCGTGGGC CAGGGCGCGT TGATGGAGGC CTGGGAAGGC
GCTTTCGACA AGTACGACCT GCTCGTCGCC CAACTGCTTC TCACCAGTGA GGATCTCGCG
CATCGGCACC GGTACCTGAA TGCGCGCAAT ACCCTGGAGA CCTTGCTGTC CTGGGGAATA
TTGCCGATCA TCAACGAGAA TGATACGGTA GTGGTGGAAG AGATCAAGTT CGGGGACAAC
GATCAGCTCT CGGCGATGAT CGCCGGTCTG ATCGGGGCCG ATCTGGTGGT CAACCTGACG
GACACTCAGG GGCTGTATGA CTGCGATCCG CGCCTGAACA GCTCGGCCGG CCTGATCCCC
GTGGTGCACC GCGTGGATGC GAAAATCCTG GCCTGCGCCA CGCCGCAGCC GGGATCGGTG
GGAACGGGGG GCATGCTGAG CAAGGTCAAT GCGGCGAGGA AGTGCCTTGC TTCGGGAATC
CCCATGATCA TTGCCCCGGG CAGGGAACGT GATATACTGC TGAGGCTCTT TGACGGCGAA
ATGCTCGGCA CCGTTTTCCT TCCCCGAAAG CGGGTGTATC AGGGCAGAAA GGTGTGGCTC
GCCAATTTGC CGAAGCCGGC GGGCGACCTG GTTCTCGATG CGGGAGCCGT CCTGGCCCTG
AGGAAGAAGG GGAAGTCGCT GCTGCCCATC GGCATCCGCG AGGTGAGGGG GACTTTCGGA
GTGGGCTCGC CCGTGCGGTG CCTGGATGAG GCCGGGAACG TCGTCGGCGT CGGACTGAGC
AACTACAGGT CGGCCGAGAT CGAGAGTATC AAGGGTCATC GCAGCGAGGA GATCGAAACC
CTCATCGGCT ACAAGCATTC CGACGAGGTG ATTCACCGGA ACAACTTCGT GTTGGCCGGG
GAAATGATGG AAGAAACGGA CGGAGGGCCG GATGCGTGA
 
Protein sequence
MQDLQDRKKF FSRCRRVVIK VGSAVLTGPR GLNRVMIHRL SDQIAEFLER ERGREVVIVT 
SGAVASGIRK IGLSERPRTI PHKQATAAVG QGALMEAWEG AFDKYDLLVA QLLLTSEDLA
HRHRYLNARN TLETLLSWGI LPIINENDTV VVEEIKFGDN DQLSAMIAGL IGADLVVNLT
DTQGLYDCDP RLNSSAGLIP VVHRVDAKIL ACATPQPGSV GTGGMLSKVN AARKCLASGI
PMIIAPGRER DILLRLFDGE MLGTVFLPRK RVYQGRKVWL ANLPKPAGDL VLDAGAVLAL
RKKGKSLLPI GIREVRGTFG VGSPVRCLDE AGNVVGVGLS NYRSAEIESI KGHRSEEIET
LIGYKHSDEV IHRNNFVLAG EMMEETDGGP DA