| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3639 |
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| Symbol | rplU |
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| ID | 4458062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4447500 |
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| End bp | 4447820 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704411 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_847744 |
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| Protein GI | 116751057 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.211161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.460303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATGCAG TTTTGAAATC GGGCGGCAGG CAGTACGAGG TGAGACCCGG GCAGGTGGTC
AAGGTGGAGA AGCTTCTCGG CGAGGTCGGG GATAAGGTCA CGCTGGATCA GGTCCTGCTG
TTTTCCGATG GCACCGACAT CCAGGTCGGG CAGCCCGTTT TGGCGAACAT CGCCGTCCAG
GGACAGATCG TGGAGCAGGG ACGCCACCGG AAGATAGTGA TATTCAAGCA CAAGCGACGC
AAGGACTACC GCAAGAAGCA GGGGCACCGG CAGCACTACA CGGCTGTGCG GGTCGAGGAA
ATCGTAACCC TTGGGCAGTA A
|
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| Protein sequence | MYAVLKSGGR QYEVRPGQVV KVEKLLGEVG DKVTLDQVLL FSDGTDIQVG QPVLANIAVQ
GQIVEQGRHR KIVIFKHKRR KDYRKKQGHR QHYTAVRVEE IVTLGQ
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