Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3628 |
Symbol | |
ID | 4458051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4439945 |
End bp | 4440649 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639704400 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_847733 |
Protein GI | 116751046 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0245801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.188091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCG TGGCTGAGAA CCTCGAACGA ATTCAGGAGC GCATGAACGC CGCCTGCTCC AGGGCGGGGC GGGACCCCGC CGCCGTGCGG CTGGTGGCGG TGACGAAAAC CGTCCCGACC GACCGCATCA GGGAAGGCGT GGAAGCGGGC CTGACCCTGC TCGGGGAGAA TTACATCCAG GAAGCGCGAA GAAAAATCGA AGCCCTGGAA GATCTGGCGG TGTCATGGCA TTTCATCGGC CACCTTCAAT CGAACAAGGC TCGGGTGGCG GCGGAATACT GCGACTGGGT TCATACGGTG GACCGGCTGC GCCTGGCCGT CGAGCTCGAC CGGCAGGCGA GAAAAAGAAA CCGCGTGATC CCCGTTCTGC TCCAGGTCAA CGTCGGCGAC GAACAGAGCA GGAGCGGGGT GTCGCCCGAT GACCTCCCGA AGCTGTTCGA AGCCGTCGCA GCGCTCTCCG GGCTGAGCGT TCGCGGTCTC ATGACCCTTC CCCCCTACTT CGAAAACGCA CAGGAGGTAC GCCCCTTTTT CAGGTTGTTG CGGGAGCTGC TGGAGCGCTT GAGGGGGATC GCTCCCCGCC CCGGCGAGCT CACCGAGCTC TCCATGGGCA TGAGCAATGA TTTCGAGGTG GCCGTCGAGG AAGGGGCGAC CCTGGTGAGA ATCGGGACGG CGCTCTTCGG GGGGCGTCCG GCTATTTCCC CATGA
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Protein sequence | MATVAENLER IQERMNAACS RAGRDPAAVR LVAVTKTVPT DRIREGVEAG LTLLGENYIQ EARRKIEALE DLAVSWHFIG HLQSNKARVA AEYCDWVHTV DRLRLAVELD RQARKRNRVI PVLLQVNVGD EQSRSGVSPD DLPKLFEAVA ALSGLSVRGL MTLPPYFENA QEVRPFFRLL RELLERLRGI APRPGELTEL SMGMSNDFEV AVEEGATLVR IGTALFGGRP AISP
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