Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3591 |
Symbol | pgi |
ID | 4458082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4401072 |
End bp | 4402724 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639704362 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_847696 |
Protein GI | 116751009 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.183253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCCGAA AACAGGACCC GATGAAGACG GCGGGCTGGA AGAAGCTGTC GGACCATTTC CAGACGATGA AAGACGTTCA CATGAGGGAC CTCTTTGCCG AGGATGGAGA CCGCTTCCAG CGTTTTTCCA TCCGGTTCGG GGATATTCTG GTGGACTACT CCAAGAACCG CCTGAACCAG GAGACGCTCC TGCTTCTGTT GGGGCTTGCG GAGGAGGTCG GCCTCAAGGA TGGCGTCGAA GCGATGTTCA CCGGCGAGAG GATCAATGAA ACGGAAGACC GGGCCGTTCT CCACACGGCG CTGCGCAACC GGTCCGATGC CCCGGTTTTT GTGGACGGCA GGGACGTGAT GCCGGAGGTG AACGCCGTCC TGAAGAAGAT GGAGGAGTTC TCCCGGCGCG TGATCTCCGG CCGGTGGAAG GGGTATTCGG GAAAGCCTGT CCGGGACATC GTCAACATCG GCATCGGCGG TTCCGACCTG GGGCCGAAAA TGGTTGCGGA ATGCCTTCGG CCCTACGCCG CGAAGGGCCT GTCGGTCCAC TTCGTGTCCA ACGTGGACGG AACCCACATC GTGGAGACGC TCAAACTCCT GGACCCCGAA ACCACCCTCT TCATGATCGC ATCCAAGACG TTCACGACGC AGGAAACGAT GACCAACGCG CACACGGCCA GAGACTGGTT CCTGAAGCAT GCGGGGGACC CGGCGCACAT CGCCCGGCAC TTCGTGGCCC TTTCCACCAA TACGGATCGA GTGAAGGCTT TCGGCATCGA TCCGGAAAAC ATGTTCGTCT TCTGGGACTG GGTCGGAGGG CGATACTCGC TGTGGTCGGC CATCGGGTTG TCCGTCGCCT GCGCCATCGG TTTCGAGGGG TTCCTGGATC TGCTGCAAGG GGCTCACGAG ATGGACCGCC ATTTCCGCGA GGAGCCTTTC GAGCGGAACA TCCCGGTCAT CCTGGCTCTC ATCGGTATTT GGTACAACAA CTTCTTCGGC GCCGAGAGTG AAGCCGTCCT GCCCTACGAT CAATATATGC ATCGCTTTCC GGCCTATTTC CAGCAGGGGA ACATGGAGAG CAACGGGAAA AGCGCGGACC GCGGCGGGGG GAGGGTTCGC CACCAGACCG GTCCCATCAT CTGGGGCGAG CCGGGGACCA ACGGCCAGCA TGCATTCTAT CAGTTGATCC ACCAGGGCAC GAAGCTGGTC CCGGCCGATT TCCTGGCCCC GGCCCTCAGC CACAACGACG TTGGAGACCA TCACGCCATC CTGCTCTCCA ACTTCTTTGC CCAGACCGAG GCCCTCATGC GCGGAAAGAA CAGGGAGGAA GTCATCGAGG AATTGAGAAG AGAGGGCAGG AGCGAGGACG CAATTCAGCG GCTCTGGCCG CACAAGGTAT TTGAAGGAAA CAAACCGACC AATTCCATCC TGTTCCGGAA GCTGACCCCG CGGGTGCTGG GAAGCCTCAT TGCCATGTAC GAACACAAGA TCTTCGTCCA GGGGGTGATC TGGAACATAT TCAGTTTCGA CCAGTGGGGC GTGGAGCTCG GCAAACAGTT GGCGGCGAGA ATCCTCCCCG AGCTCAACGA TCGCACGACC GTGGCTGCCC ACGACTCCTC CACCAACGGC CTGATCAACG CATACAAGCA AATGAGGGGT TGA
|
Protein sequence | MLRKQDPMKT AGWKKLSDHF QTMKDVHMRD LFAEDGDRFQ RFSIRFGDIL VDYSKNRLNQ ETLLLLLGLA EEVGLKDGVE AMFTGERINE TEDRAVLHTA LRNRSDAPVF VDGRDVMPEV NAVLKKMEEF SRRVISGRWK GYSGKPVRDI VNIGIGGSDL GPKMVAECLR PYAAKGLSVH FVSNVDGTHI VETLKLLDPE TTLFMIASKT FTTQETMTNA HTARDWFLKH AGDPAHIARH FVALSTNTDR VKAFGIDPEN MFVFWDWVGG RYSLWSAIGL SVACAIGFEG FLDLLQGAHE MDRHFREEPF ERNIPVILAL IGIWYNNFFG AESEAVLPYD QYMHRFPAYF QQGNMESNGK SADRGGGRVR HQTGPIIWGE PGTNGQHAFY QLIHQGTKLV PADFLAPALS HNDVGDHHAI LLSNFFAQTE ALMRGKNREE VIEELRREGR SEDAIQRLWP HKVFEGNKPT NSILFRKLTP RVLGSLIAMY EHKIFVQGVI WNIFSFDQWG VELGKQLAAR ILPELNDRTT VAAHDSSTNG LINAYKQMRG
|
| |