| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3545 |
|---|
| Symbol | |
|---|
| ID | 4458141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4338637 |
|---|
| End bp | 4339620 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639704316 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_847650 |
|---|
| Protein GI | 116750963 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCAGC CGGGCGCGAA TCGGGTTCTC CTGGAGGTCG ACGACCTTCG AACGCATTTC
TTCACCGAAA GGGGTGTTGC CAAGGCCGTC GACGGCGTGG GTTTGCGCCT CGATGAAGGC
CGGATACTCG GCATCGTGGG TGAATCGGGA TGCGGCAAGA GCGTCACCGC CCATTCCATC
CTGCGCCTCG TTCCCTCCCC GCCCGGGCGG ATCGTCGGGG GCGCGGTCCG GTTCAACGGC
AAGGACCTGC TCGCGCTGAG CGAAAAGGAG ATGCAGGAAG TCCGGGGCAG GGAGATTTCC
ATGATCTTCC AGGAGCCCAT GACCTCCCTC AACCCGGTTT TTCGCGTGGA AGATCAGATC
GTCGAAGTCC TGCAGCGCCA CATGGCGCTC TCCCGGCGGG ACTCCCTGGA CAGGACGCTG
GAGCTGCTGA AAATGGTCGG CATCCGCTCT CCCGAGATCC ACATGAAAGA CTATCCGCAC
CAGATGAGCG GAGGGATGCG GCAGCGCGTC ATGATTGCCA TGGCCCTGGC GTGCAGCCCA
AGGCTGATCA TCGCGGACGA GCCCACCACG GCCCTGGACG TGACCATCCA GGCGCAGATC
CTCGACCTGC TCAGAGAGCT CCGGGAGAAG ACCCGAACGG CCATCCTGCT CATCACGCAC
GACCTGGGCG TCATTGCGAA CCTGGCCGAG CAGGTCCTCG TGATGTACAC GGGCCGCGTC
GTGGAAGAAG CCCCCGTGAG GGCCCTTTTC GAGTTTCCCT TGCATCCTTA TACCCGGGGC
CTGATGCGCT CGATCCCGGG AAGGGCCGCC GGCGGGGAAA AGCGGCTGGA AGCGATTCCG
GGCGTGGTGC CGAACCTCCT GGAACTGCCG CGCGGCTGCA AGTTCAACAC CCGCTGCCCG
TCTGCCTTCG ATCGCTGTTT CGAGGAAGAA CCGGGCCTGC TGCACCCCGA AGGCGGGCAC
CCCGTCCGGT GCTGGCTCTA TTGA
|
|---|
| Protein sequence | MDQPGANRVL LEVDDLRTHF FTERGVAKAV DGVGLRLDEG RILGIVGESG CGKSVTAHSI
LRLVPSPPGR IVGGAVRFNG KDLLALSEKE MQEVRGREIS MIFQEPMTSL NPVFRVEDQI
VEVLQRHMAL SRRDSLDRTL ELLKMVGIRS PEIHMKDYPH QMSGGMRQRV MIAMALACSP
RLIIADEPTT ALDVTIQAQI LDLLRELREK TRTAILLITH DLGVIANLAE QVLVMYTGRV
VEEAPVRALF EFPLHPYTRG LMRSIPGRAA GGEKRLEAIP GVVPNLLELP RGCKFNTRCP
SAFDRCFEEE PGLLHPEGGH PVRCWLY
|
|---|
| |