Gene Sfum_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3536 
Symbol 
ID4458167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4326241 
End bp4327215 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content63% 
IMG OID639704307 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_847641 
Protein GI116750954 
COG category[C] Energy production and conversion 
COG ID[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTCA CCGTAGCGGC GGAATCCCTC AGCAGCTGCG CCGGGTGTGA AATCTCGATG 
CTCAACATGG GCGGACTGTT CCTGGAATTG CTGAAGGAAA TCCGCATCGT TCACATGCCT
CTCCTCTTCG ATCACAAGTA TTTCGGCCAA GCCGGCGAGG AAAACTTCAT CGGGATTCCG
GAAGCCGATA TCGGGATCGT CAGCGGGGGG ATTCGCAACG AGGAGCAGCT CGAAGTGGCC
CTGAAGGTGC GCGCCCAATG TCGAATCCTG GTGGCCCTCG GGACGTGCGC CACTCATGGC
GGCATCCCCG CGCTCATGAA CCGGTACTCC GACGAAGACC TGTTCCGTCG CTACTACCGG
ACCAGCGAAA CCACCGAGGC GGCCGCTCCG CCCAACGAGG TCGTCCCCAG GTTCCTCGAT
CGGACCTACG CCCTGGACGA AAAAGCCAGG GTGGATGTGT ACATGGCCGG TTGTCCTCCG
CATCCGGATT ATCTCGGCGC GATGTTCCGA ACGCTCCTCG ACGGGCAATG GCCGGAAATG
CCGACCAAGA GCGTTTGTGA CACCTGCCCC ACGCGCCGGG AAGGCAAGGG CAACGTCCAG
AAGATCCGGC GCTTCACTCG AAGTGCCCGA TTCCAGAATG AGAAACCGCT CTCGGAAATG
AAGTGTCTCC TTGAACAGGG GCTTCTGTGC ATGGGCCCCG TGACGCGCGC CGGTTGCGCC
GGCCTGCACG GGAACGTGCC CATGTGCATC AGCGCCAGGG TGCCGTGCCG GGGATGCTTC
GGCCCGGTCA AACAGGACGG CAACCAGTTG CTCGATATGC TCAACGCCCT GGCAAGCAAC
GGCATCGATG TCCGGAGTAT CCCGGACCGG CATTCGCTGT TGAGGTTTTC CGGAGCGCAC
GGGCGTCTTA TCAGGGCGTC CGGCAGAAGC CCGAGAGGCG AGGGCAGGGA CGTCCGCTCC
CCGGCGGAAC ACTGA
 
Protein sequence
MPVTVAAESL SSCAGCEISM LNMGGLFLEL LKEIRIVHMP LLFDHKYFGQ AGEENFIGIP 
EADIGIVSGG IRNEEQLEVA LKVRAQCRIL VALGTCATHG GIPALMNRYS DEDLFRRYYR
TSETTEAAAP PNEVVPRFLD RTYALDEKAR VDVYMAGCPP HPDYLGAMFR TLLDGQWPEM
PTKSVCDTCP TRREGKGNVQ KIRRFTRSAR FQNEKPLSEM KCLLEQGLLC MGPVTRAGCA
GLHGNVPMCI SARVPCRGCF GPVKQDGNQL LDMLNALASN GIDVRSIPDR HSLLRFSGAH
GRLIRASGRS PRGEGRDVRS PAEH