Gene Sfum_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3534 
Symbol 
ID4458165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4322956 
End bp4325808 
Gene Length2853 bp 
Protein Length950 aa 
Translation table11 
GC content62% 
IMG OID639704305 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_847639 
Protein GI116750952 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins
[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.93778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACATTC AGTTGATGAC GCTCACCGAG GTGATTCGGG TCGAGGGCGA GTTGGGGCAT 
TTCCGGGTGA CGTTGCGCCG GCATCCGCGT TACGTCGACA TGGACCACTG CATTTCGTGC
GGCGAGTGTG CCAAGGTGTG CCCGGTGGAG GTCAAGGACG AGTTCAACGA GAAGATGAGC
ATCCGGAAGG CCATCTACGT CAAGTACCCG CAGGCGGTTC CGCTCAAGTA CCAGATCGAC
GGCCGCAACT GCATCCGGGT TCGCGGCGGA GACTGCGGCG GGTGCGAGAA GGTCTGCCCT
TCCGGTGCCG TCCGGTTCGA CGAAGAGGAG GCGATCGTCG AGGTCGAGGT GGGCTCGATC
GTGCTCGCGC CGGGGTTTCG TCCCTTCAAT CCGTCCGGCA TCCAGAACTG GGGATACGGC
GTTTTTCCCA ATGTCATCAC GGCCATGGAA CTGGAACGGT TCCTGGCGGC GTCCGGTCCC
ACCGACGGGC ATCTCATCCG CCCCTCCGAC GGGAAGCAGA TCAGGAAAAT CGCTTTCGTG
CAGTGCGTCG GCAGCCGCGA CATCAACAAG GCGGGCCGCG GTTACTGCTC TTCCGTCTGC
TGTATGTACG CCATCAAGGA GGCGATGATC GCCAAGGACC ATGTCAAGGA ACTGGACATC
TCGATCTTCT TCACGGACAT GCGGACGCAC GGCAAGGATT TCGAACGTTT CTACGAGCGG
GCGCGGCAGA GGGGCATCAA GTTCTTCCGC TGCCGGGTTC CTTCCATCGA ACCTGCCGAG
GAGAGCGGAG ACCTTTACTT CCGCTATCTC ACCGATGAAG ACAAGCAGAT CCGGGATGAA
TTCGACCTGG TCGTGCTCTC GGTGGGACTG GACAGTCCCG CCGACATACA GAAACTGGCG
GATTGCGTCG GCATAGAGTT GAACCAGAAC CGGTTCGCGC GCACGTCGTC CTTTACTCCG
GTGACGACCA GCAAGCCCGG AGTCTATGCC TGCGGAGTGT TCACGGGCCC CAAGGACATT
CCGCTGTCCA TCATCGAAGC CTCGGCCGCG GCCACCGCGG CCGCAACTCC GCTCTCCGAC
GTGCGGTACA GTCTGTCCCG CCAGAAGACG TTTCCGGCGG AGCGGGACGT GAGCGGCGAG
GAACTGAGGA TCGGCGTTTT CGTGTGTCAC TGCGGATCCA ATATCGCGGA CGTGGTGGAC
GTGGACGCCG TGGCGGCGTA TGCGGCCACG CTTCCTCGCG TTGCCTTCGT CGAGACATTG
CTGTTCGCCT GTTCTCAGGA TTCGCAGAAT CTGATGTGCC GCAGGGTCCA GGAGAAGAAG
CTCAATCGCG TGGTGGTGGC GGCTTGTACT CCCAGGAGCC ACGAGGCGTT GTTCCGGGAG
ACCCTGCGGG CCTCCGGGCT CAACGAGTGC CTGTTCGAGA TGGCCAATAT TCGCAATCAG
GGTGCGTGGG TGCATTCCGG GGAGCCCGAG GCGGCCACGT CCAAGGCCAT GGACATGGTG
CGCATGGCCG TCGCCAAGGC CGGCCTGCTC GAACCGCTGG CTCCCGTTTC GGTGCGCATC
AATCCGCAGG CGCTGGTCAT CGGCGGCGGT CTGGCCGGCA TGGTCGCGGC CCTCGGCCTC
GCCGATCAGG GGTTTCCCGT TCACCTGGTG GAAAAGGCTT CCCAACTGGG CGGCAACGCC
CGGCATTTGT TCAAGACGTG GAAGAACGAG CCGATTCCGT CCTACGTGGA GCAACTGATC
GCCCAGGTCA AGGAACACGA CCTGATCTCG GTTCATTTGA AATCCGCCAT TTCACACGCG
GAGGGGTTCG TCGGGAGTTT CCGCTCCACC ATCCAGAAGT CCACGGGACC GCAGACGATC
GAGCACGGCG TGGCCGTTCT GGCCACCGGC GGCCAGGCCC TGAAACCGGA TGAATACGGC
TACGGTCTGT CTCAAAACAT CCTGACCGCG CTGGAATTCG ACAAGCTCCA TCTGGTGGGG
GATGAACGCA TCAAATACGG GCACAACTTC GTGTTCATCC AGTGCGTGGG ATCGAGGGAG
CCGGGCCGGG CCTATTGTTC CAGGGTCTGC TGCACCCATT CCATCCAGTC CGCCATCGCC
TTGAAGCAGG AAGACCAGTC GCGGCGCATC TTCATCCTGC ACCGCGACAT CCGCACCTAC
GGGCTGAGGG AGGAACTCTA CACCAAGGCG CGCGAGCTGG GCGTCGTTTT CATCAACTAT
GAAACGCACC GGAAACCGAA CGTTCTGCTC AATGAAGATC GTCTCTCGGT GGTGGTCTGG
GATCACGTGC TTCACGAGCC GTTCAGCATT CCGGCCGACG TACTGGTTCT GGCCACGGCG
ATCCTCCCGA ATCCCGAAGT GCGGGATCTG GCCAGGTTGT ACAAGCTCCC GGTGGATTCG
GACGGGTTTC TCCAGGAAGC ACACATGAAG CTGCGTCCCG TCGATTTTTC CACCGACGGG
CTGTTCCTGG CCGGCCTGGC CCACTATCCC AAACCCATTG AAGAGGCGAT CGCCCAGGCG
CAGGCGGCGG TCTCACGGGC GGTCACCGTG CTTTCCCAGC GATGGATCGA CCTCGACTAC
GTCAAGGCCC GGATCAATGA AACGACATGC GACGGGTGCG CTCTGTGCCT TGATGTGTGC
CCCTACGGCG CCCTTCAGCT CGAGGAAATT CCAGGATCGA ACGGCAGGCA GCACGCCGTG
GTCAAGGCGG CCAGGTGCAA GGGTTGCGGT GCGTGTCAGG CGACGTGTCC CAAGGAGGGA
ATCAGCGTCG CGGGGTTCAC CTACCGCCAG ATTTCCGCGC AGGTGAAAGC CGCTTTGAGC
GACGGTGAAA AGAGGTTTGC TTATGACATT TGA
 
Protein sequence
MNIQLMTLTE VIRVEGELGH FRVTLRRHPR YVDMDHCISC GECAKVCPVE VKDEFNEKMS 
IRKAIYVKYP QAVPLKYQID GRNCIRVRGG DCGGCEKVCP SGAVRFDEEE AIVEVEVGSI
VLAPGFRPFN PSGIQNWGYG VFPNVITAME LERFLAASGP TDGHLIRPSD GKQIRKIAFV
QCVGSRDINK AGRGYCSSVC CMYAIKEAMI AKDHVKELDI SIFFTDMRTH GKDFERFYER
ARQRGIKFFR CRVPSIEPAE ESGDLYFRYL TDEDKQIRDE FDLVVLSVGL DSPADIQKLA
DCVGIELNQN RFARTSSFTP VTTSKPGVYA CGVFTGPKDI PLSIIEASAA ATAAATPLSD
VRYSLSRQKT FPAERDVSGE ELRIGVFVCH CGSNIADVVD VDAVAAYAAT LPRVAFVETL
LFACSQDSQN LMCRRVQEKK LNRVVVAACT PRSHEALFRE TLRASGLNEC LFEMANIRNQ
GAWVHSGEPE AATSKAMDMV RMAVAKAGLL EPLAPVSVRI NPQALVIGGG LAGMVAALGL
ADQGFPVHLV EKASQLGGNA RHLFKTWKNE PIPSYVEQLI AQVKEHDLIS VHLKSAISHA
EGFVGSFRST IQKSTGPQTI EHGVAVLATG GQALKPDEYG YGLSQNILTA LEFDKLHLVG
DERIKYGHNF VFIQCVGSRE PGRAYCSRVC CTHSIQSAIA LKQEDQSRRI FILHRDIRTY
GLREELYTKA RELGVVFINY ETHRKPNVLL NEDRLSVVVW DHVLHEPFSI PADVLVLATA
ILPNPEVRDL ARLYKLPVDS DGFLQEAHMK LRPVDFSTDG LFLAGLAHYP KPIEEAIAQA
QAAVSRAVTV LSQRWIDLDY VKARINETTC DGCALCLDVC PYGALQLEEI PGSNGRQHAV
VKAARCKGCG ACQATCPKEG ISVAGFTYRQ ISAQVKAALS DGEKRFAYDI