Gene Sfum_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3483 
Symbol 
ID4458220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4255175 
End bp4255882 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content58% 
IMG OID639704255 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_847589 
Protein GI116750902 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.510925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.220694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAATGGT TAGCTCAGTT TGAGGGTATC GCACGCACTT CGCCTTTCCT GGCTCTCTTA 
TTGGCTTTCT GTGGCGGCGT GCTGGCGAGT TTCACCCCCT GCACGTACCC CATGATGCCC
ATCACCGTGG CGTTCATCGG TGGAAAGGCC AATGGGAGCC GATGGAGGGG ATTCATCCTC
TCTATTTTCT ACGTGTTGGG CATGGCGGTG ATCTACTCCG CTCTCGGAGC GTTCGCGGCC
ATGTCGGGCC AACTTTTCGG AACCTTGACC GCAAACCGTT GGACCTATCT GCTGGTCGGG
AACGTGTGCC TTTTCTTCGG TTTGGCGATG CTGGAAGCCG TTCCCCTTTC CCCGCCGGCC
TTTCTCAATC GGCTGCAGGT CAAGGACATG CGGGGGCATG ACATACTGAC GAGCGTCCTC
CTGGGTGGAG CATCGGCCCT GGTGGTGAGC ACCTGCACCA CTCCAATCCT GGGCGTGCTG
CTGACCCTGG TGGCCACGAG GCAGGACGTG GCCTGGGGCA TCGGCATGCT TTTCGCCTTC
GCGTATGGCC TCGGAAGTCT CGTTATCATC GTGGGCACGT TCACGGGACT GCTGACTTCC
CTCCCCAGGT CGGGGGTCTG GATGAGACGG GTGCAACGGT TTTTCGGAGT GATAATGATC
CTCGCGGCTG AGTATTTCTT CATCAAGACA GGAGAATTCT GGTTATGA
 
Protein sequence
MEWLAQFEGI ARTSPFLALL LAFCGGVLAS FTPCTYPMMP ITVAFIGGKA NGSRWRGFIL 
SIFYVLGMAV IYSALGAFAA MSGQLFGTLT ANRWTYLLVG NVCLFFGLAM LEAVPLSPPA
FLNRLQVKDM RGHDILTSVL LGGASALVVS TCTTPILGVL LTLVATRQDV AWGIGMLFAF
AYGLGSLVII VGTFTGLLTS LPRSGVWMRR VQRFFGVIMI LAAEYFFIKT GEFWL