Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3468 |
Symbol | |
ID | 4458205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4235017 |
End bp | 4236357 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639704240 |
Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
Protein accession | YP_847574 |
Protein GI | 116750887 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.694079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0198474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGCA GGGCGCTGGT CGTCGGCATG GGAGTGTCCG GCCGGTCGGT GTGCGAGTTG CTCTTGCGCA ACGGAGTCGA GGTCGTCGCG ACGGACCTCA GGCCGCTCGA CCGGTTCGGC GGCACCCTGG ACGAGCTGCG TGCGAAAGGC TGCCGGTTAA GGTTGGGGGA ACATCACCCG GATGATTTCC TGAACGTCGA CCAGATCATT GTGAGTCCGG GAGTGCCGTC GCTGCTCGAA CCGCTGCGTG AAGCCCGCCT CAGGGGTATC GAGATCGTGG GCGAATTCGA ATGGGCCTGG CGCCAGGTGG ACGCGCCCGT GATCGCGGTC ACCGGGACCA ACGGCAAGAC GACGACCACC GCTCTTATCG GGGAAATGAT CAAAGCGTCC GGCACGCGCG TGTTCGTGGG GGGCAACATC GGGACGCCGC TGAGCCGGTG GCTGCTGGAC GGAGACCGGG TGGACTGCAT GGTGCTCGAA GTGAGCAGTT TTCAACTGGA CACGGCGTTC CTGTTCAGGC CCGAGGTGGG AGTCTTGCTG AACGTGACCG AGGACCACCT GGATCGATAT CGCGATTTTG AAGAGTACAC GGAATCCAAG CTCTCGATGT TTGGGCGCCA GGAGTCCACG GATGTCGCGG TGATCAACCT GGACGACCCG GTCTGCGGCT CGAGGCCTTT CAACGGAAAG GGCAGGCTTC TGACCTCGAG CCGGAATGAT CCGCGCACGC ACGCCCATGT CGAGGACGGG CGGATCGTCG TGAACGTTCC GTGGAAGCCG GAGTTCCGTC TCGACCTGGC GGATCTGCGG CTCAAAGGGG TCCACAACGA GGAGAACGTG CTCGCCGCCA TTCTTGCATG CCTGGCCATG GACGTAGTCC CCGAGGCCGT CGCGCGGGCC GCCGGGACCT TTGGCGGCCT GCCCCACCGT GTCGAATGGG TTCGAGCGGC CGGGGGCGTC GATTACTACG ACGATTCCAA GGGGACCAAC GTCGGCGCCG TCGTCAAGGC GATCGAAAAT TTCGATCGAC CCGTTCTCCT CTTGTTGGGG GGAAGGGACA AGCTGGGCTC CTACGCTCCC ATTGCCGAGC GGATGAGGAC CAGGGGCAAG GGGGTGTTCG TGTTCGGAGA ATCGGCTCCA CGAATCCACG CAGAACTGCG CGACAAGGTT CCCATCCGGT TGTTTCCCGA TTTGGAGGGT GCGTTCTCGG CCGCCGTGGA ACGGGCGCAG GCGGGAGACA TCGTGCTCCT TTCCCCGGCC TGTTCGTCTT TCGATCAGTA CGAGAGCTAC GCGCAGAGGG GGGACCATTT CAAGAAACTC GTAGCCGCCC TTCCGGGGTA G
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Protein sequence | MPGRALVVGM GVSGRSVCEL LLRNGVEVVA TDLRPLDRFG GTLDELRAKG CRLRLGEHHP DDFLNVDQII VSPGVPSLLE PLREARLRGI EIVGEFEWAW RQVDAPVIAV TGTNGKTTTT ALIGEMIKAS GTRVFVGGNI GTPLSRWLLD GDRVDCMVLE VSSFQLDTAF LFRPEVGVLL NVTEDHLDRY RDFEEYTESK LSMFGRQEST DVAVINLDDP VCGSRPFNGK GRLLTSSRND PRTHAHVEDG RIVVNVPWKP EFRLDLADLR LKGVHNEENV LAAILACLAM DVVPEAVARA AGTFGGLPHR VEWVRAAGGV DYYDDSKGTN VGAVVKAIEN FDRPVLLLLG GRDKLGSYAP IAERMRTRGK GVFVFGESAP RIHAELRDKV PIRLFPDLEG AFSAAVERAQ AGDIVLLSPA CSSFDQYESY AQRGDHFKKL VAALPG
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