Gene Sfum_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3449 
Symbol 
ID4458221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4212089 
End bp4212631 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content62% 
IMG OID639704221 
Productsuperoxide dismutase, copper/zinc binding 
Protein accessionYP_847555 
Protein GI116750868 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000937306 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGGAAAA GTCGCGCGGC AGGATTGCTG GTTTTGCTCG CGGTGGCGGT ACTGGCGCTC 
GGAGGCTGCT CGCGAAGCGA TGTGACGAGT GTCGAGGTGA ACAAGGCCAT AGCCGTGATG
CATCCCACGG AAGGCAGCAA AGTCAAAGGC TTCGTCACCT TCACCAAGGA AAAGAACGGC
ATTCGCGTGG TGGCGCAATT CGAAGGACTG ACACCCGGCC TGCACGGATT TCATATTCAC
GAATATGGCG ACTGCAGCTC TCCGGATGCC GGATCGGCGG GCGGGCACTT CAACCCTGCG
GGGGCGCCTC ACGCGGCACC CACCGCAGAG AAGCACCACC TGGGGGATCT TGGAAATGTG
GAAGCTCCCA AGAGCGGCCC GGCCAAATAC GACAAGGTGT TCGATTTTCT TAAGTTCGAA
GGGCCCTATT CGATCGTCGG CAGGGGCGTG GTCGTGCATG CCGATCCCGA CGACTTCAAA
ACCCAGCCCA CGGGCGGGGC AGGCGCTCGG GTGGCCTGCG GGGTGATCGG GGTCGCCAGG
TAA
 
Protein sequence
MRKSRAAGLL VLLAVAVLAL GGCSRSDVTS VEVNKAIAVM HPTEGSKVKG FVTFTKEKNG 
IRVVAQFEGL TPGLHGFHIH EYGDCSSPDA GSAGGHFNPA GAPHAAPTAE KHHLGDLGNV
EAPKSGPAKY DKVFDFLKFE GPYSIVGRGV VVHADPDDFK TQPTGGAGAR VACGVIGVAR