| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3438 |
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| Symbol | |
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| ID | 4458241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4199595 |
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| End bp | 4201418 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639704208 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_847544 |
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| Protein GI | 116750857 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.588898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000161563 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAACGA AAACGAAGTT CTCCCTTTGG TACGTGGTGA TCGCCATCTG GGGAATACTC
GCGCTGCAGA ATTACATCGC CTCGCAATAC GCGCCGAGGG TCGTGCCCTA CAGTGAATTC
CTGAGCGCCC TCAAGGACGA TCGCGTCGTC GAGGTCGTCA TCACCCAGGG GCGCATCGCC
GGAACGATGA AAGTCACGGA AGAGGGGCAA AGCAAGGAGA TCCCGTTCAC CACGTTCAGG
GTGGACTCCG ATCTTTCCGA GGAACTCTCG AAACACAATA TCAGGTTTCG CGGGCAGCCC
GAGAGCACCT TTCTGCGGGA TCTCCTCTCG TGGGTCCTGC CCGCCTTCAT TTTCTTCGGC
CTTTGGTTTT TCCTGATGAA GCGCTTGAAT CCCGGTGCCG GCATGATGTC CTTCGGGAAG
AACAAGGCCA AGGTCTACGC CGAAAAGGAG ATCGACACCC GCTTCGAGGA TGTGGCCGGA
GCGGATGAAG CCAAGGCGGA ACTGGTGGAA ATCGTGGACT ATCTCAAGGA ACCCGGGCGT
TATCAGCACC TTGGGGGGAG GATGCCCAAG GGGGTTCTGC TCGTCGGCCC TCCGGGCACG
GGCAAGACGC TGCTGGCCAG GGCCGTCGCC GGAGAGGCGA GCGTCCCCTT CTTCACCATC
AGCGGGTCGG AATTTGTTGA GATGTTTGTC GGGGTGGGCG CGGCAAGGGT GCGCGAGCTC
TTCCATCAAG CGCGGGAAAA GGCCCCCTGC ATCATTTTCA TCGACGAGCT GGATGCCATC
GGCAAGGCCC GGGGAGCGCT CACCATCGGC GGGCACGATG AACGGGAGCA GACGCTGAAC
CAGCTCCTCG TGGAAATGGA CGGGTTCGAC CCGAGGGTGG GCGTGGTCAT CCTGGCGGCG
ACCAATCGCC CGGAAACCCT CGACCCGGCT CTGCTCAGGG CGGGAAGGTT CGACCGGCAG
GTCCTGGTGG ATCGACCGGA TGTCATCGGG CGGGAGGCCA TCCTCAAGAT ACATGTAAAG
AAAGTGAAGC TCGGCGAGCA AGTCGATCTC AAGGTCATCG CCCAGAAGAC TCCGGGGTTT
TCCGGGGCCG ATCTGGCGAA CGTGATCAAC GAAGCGGCGC TGCTGGCCGC AAGAAAGAAC
AAGGCCGCCA TCGACATGCA GGACCTGGAC GAGGCGGTCG ACCGGATCAT CGCGGGCCTT
GAGAAGAAGA ACCGCCTGAT CAACCCGAAG GAAAAGGAGA TCGTGGCGTA TCACGAGACC
GGGCACGCCC TGGTCGCCGC CTTCACCCCC GGAGCGGACA AGGTTCACAA GATTTCCATC
ATCCCGAGAG GCATCGCCGC CCTCGGATAC ACCCAGCAGC TGCCGACCGA GGATCGCTAT
CTGATGACGC GCGGGGAGCT TCTGGGCAAG ATCGACGTGC TCCTGGGAGG AAGGATGGCC
GAGGACATCA TCTTCGGGGA GGTTTCCACG GGGGCTCACA ATGATTTGCA GCGTGCGACG
GACATCGCCC GCGCGATGGT CTCCGAGTAC GGGATGGGAA CGACCCTCGG GCTGACCACC
TACCCGCGTC AGAACCGGCC GATGTTCCTG AGCCCGGAAC AGATGCCGAT GGCCGGGAAG
GAATACAGCG AAGCGACCGC CGCCAGGCTC GACGAAGAGG TCAAGGAGAT CGTCACCGAG
AGGGCCGCGG GCGTGCGCGA GCTGCTGTCG CAATACAGGG CGCTTCTTGA GGAAACCGCG
GCGGAGCTTC TGAAAAAAGA AGTGCTGGAC AGCGAGGAAT TCTACCGGAT GGTGGAAGCG
CACCGTACCG GCGGCAAACC TTAG
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| Protein sequence | METKTKFSLW YVVIAIWGIL ALQNYIASQY APRVVPYSEF LSALKDDRVV EVVITQGRIA
GTMKVTEEGQ SKEIPFTTFR VDSDLSEELS KHNIRFRGQP ESTFLRDLLS WVLPAFIFFG
LWFFLMKRLN PGAGMMSFGK NKAKVYAEKE IDTRFEDVAG ADEAKAELVE IVDYLKEPGR
YQHLGGRMPK GVLLVGPPGT GKTLLARAVA GEASVPFFTI SGSEFVEMFV GVGAARVREL
FHQAREKAPC IIFIDELDAI GKARGALTIG GHDEREQTLN QLLVEMDGFD PRVGVVILAA
TNRPETLDPA LLRAGRFDRQ VLVDRPDVIG REAILKIHVK KVKLGEQVDL KVIAQKTPGF
SGADLANVIN EAALLAARKN KAAIDMQDLD EAVDRIIAGL EKKNRLINPK EKEIVAYHET
GHALVAAFTP GADKVHKISI IPRGIAALGY TQQLPTEDRY LMTRGELLGK IDVLLGGRMA
EDIIFGEVST GAHNDLQRAT DIARAMVSEY GMGTTLGLTT YPRQNRPMFL SPEQMPMAGK
EYSEATAARL DEEVKEIVTE RAAGVRELLS QYRALLEETA AELLKKEVLD SEEFYRMVEA
HRTGGKP
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