Gene Sfum_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3419 
Symbol 
ID4458255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4184942 
End bp4185727 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content59% 
IMG OID639704191 
Productmethyltransferase type 11 
Protein accessionYP_847527 
Protein GI116750840 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00381882 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCAAT CCGAACTGAC GGTTTGCTTT TATGATGTCT TCGACGCCTC TTTGCCTCGT 
CTGGGGCCTG GAGACGATCT TTCCACACAA AAGGCCATCA GCCTGCTGCG CGCGGCAAAG
CCGGAACGGA TGAATCCTCC GGGCCCGTTG GGGCTCAAGA TCCTTGATCT GGGGTGTGGA
AACGGGGCTC AGACCATCCA GTTGGCAAAG CACCTCGACG GAACCATCGT GGCGGTCGAC
AACCACGAGC AATACCTGAC CGAGCTCAGG CGGAGGGCCG TCGCGCAGGG CGTTTCGGAC
AAAATCCATA CCTGCCTCGA CGATATGCGC GACTTCACGA AGCGAGAGGA ACGCTTCGAT
CTGATCTGGT CGGAAGGAGC CGTGTACTTC ATGGGATTTG CGGAAGGGCT GGCCGCCTGT
CGAAAGCTGC TGGTGCCGGG CGGGTTGATG GCCGCATCCG AGCTCACCTG GTTCCGGCCC
GACCCGCCGG CCGAGTGTCG AGAGTATTTT GCCGGCGTCT ATCCTCCCAT GGTCGATAGC
GCCGCTAACC TGGCGACCGT CGAAAACTGC GGATACGAGG TGCTGGGATA CTTTGCATTG
CCGGAATCGG CATGGCTGGA AAGCTTTTAT CGCCCCATCG AGAATCGGCT TCGGTCACTC
CAGGAAAAGT ATGCCGCGGA CCGTGCCGGA AGCGAAACAG TCGAATCCAT CCGCAAGGAG
GTCGACATCT ATCGCAAGTA CTCCAGTTGG TATGGCTATG TCTTCTACCT GATGCAAAGC
CGTTGA
 
Protein sequence
MDQSELTVCF YDVFDASLPR LGPGDDLSTQ KAISLLRAAK PERMNPPGPL GLKILDLGCG 
NGAQTIQLAK HLDGTIVAVD NHEQYLTELR RRAVAQGVSD KIHTCLDDMR DFTKREERFD
LIWSEGAVYF MGFAEGLAAC RKLLVPGGLM AASELTWFRP DPPAECREYF AGVYPPMVDS
AANLATVENC GYEVLGYFAL PESAWLESFY RPIENRLRSL QEKYAADRAG SETVESIRKE
VDIYRKYSSW YGYVFYLMQS R