Gene Sfum_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3389 
Symbol 
ID4458295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4158024 
End bp4158542 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID639704161 
Producthypothetical protein 
Protein accessionYP_847497 
Protein GI116750810 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0597569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA AGGACATCAC CCGGATCACC GTGGGCAGAC AGTCCATCAG TCTCGTTGGA 
CTGCGAAGCC TCCTGGAGGA AATGGCCGAG AGCCACGCGG GCAGGGACGA GAAAGAAATC
ATCGAATACA TGATGAATCA TCTCGGCCGG CAGAACTACA TCCCCGCCTC CGCCAGGGAG
GAATACGGTC GGGCTTTCAT CCGGGAATTT CGCAAATTCA CGGGGCAGCC TTACACGGAA
GCGCCGCGCG AAGGGCTGGA TATCAAAGTC CTGGGAGCGG GCTGCAACCA ATGCGACAAG
CTGACGCAGC TGGTCATGGA AGTTTTGAGC GAAAACCGGC TGCCGGGCAG TGTGGAACAT
GTGACCGACT ATAAGGAAAT CGCGGGTTAC GGGCTGATGG GCGTCCCGGC ACTCGTGATC
GACGGCAAGG CCTATTCGGT CGGCACCGTG CCGCCCAAGA GCCAGATCGA GAAGTTCATC
GCCCGGGCCG TCGCCGAGGC CGCGGCGCGA ACGGAATGA
 
Protein sequence
MAEKDITRIT VGRQSISLVG LRSLLEEMAE SHAGRDEKEI IEYMMNHLGR QNYIPASARE 
EYGRAFIREF RKFTGQPYTE APREGLDIKV LGAGCNQCDK LTQLVMEVLS ENRLPGSVEH
VTDYKEIAGY GLMGVPALVI DGKAYSVGTV PPKSQIEKFI ARAVAEAAAR TE