| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3379 |
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| Symbol | |
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| ID | 4458320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4146678 |
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| End bp | 4147907 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639704151 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_847487 |
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| Protein GI | 116750800 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.189038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGG CGCAGGAAGA CGAAAAACGC AGGAAAGTCT TCAGGGAAAC ATTGAAGGCC
TCCGGTGCGG TTCTCATTCT GGTTCTGCTG ATGGCCTGGC TTGCCGGGGG CTTCTTGAAG
AAGGTGCGAC CCGGCCCCGC CCAACCCGTG GCGCCGGAGC CCGGAGTCAG GATGCAGGCA
GTGGAGCGGC GCACTTTCCC GACAGTCGTC GAACAGGTCG GAACGGTCAG ATCCCGGGCA
GAGGCCCGCG TCTCCAGCCG AATCATCGCG CAGGTCAGGG AAATCCTGGT GCGCGAAGGC
GATTCGGTGG TCGGTGCGGA TGAGAAGGAC GGGAAACCGA CGGTCATGGC GCGCCTGGAT
GACGGCGACA TTCAGGCCCG TCTGCGCCAG GCGGAGGCAC AACTGGCTGC GGTCGGGAGG
GCCAAGGAAG TTTCCTCCGC CCGGTTGGGC GCCGCCAGGT CCCAGGTGGA GGCAGTGCGG
GCGAACCGCG AAAAAGCGTT TTCCGACTAC AAACGCTACG CGGAGCTGAA GCGTGACCAA
GCCGCCACGG GCCAGCAGGT CGAGCATGCC CGCGCGCTTC GAAATGCCAC GGAAGCTCAA
CTGCAGGGTT CGATCAAAGA AGTGCAGGTC GCTCGAGGAG AGCTCGAGAG GGTGGAGGCT
CAGCGGGAAC ATGCGGAGGC TGCCGTTGCG GAAGCTCGGG CCATGCTGGA CTACACGATT
ATCCGGGCTC CTTTTTCGGG CAAGGTGATC CGGAAGATGG TCGATGTGGG GGACATGGCC
TCCCCGGGAC AGCCCCTGTT CCTGCTGGAA GCCCGGTCGG CACCGGAGCT GCACGCCCAG
GTGACGGAAT CCCTGGTGCC CTTCCTCAAG ACGGGTCAGG AATTCAGCAT TCGAATCGAT
GCCCTGGACT GCTCGTTCCC GGGGGTACTC AGCGAAATCG TTCCCAGGTC CGACCCCGTC
ACCCGAACGG TCCAGGTCAA GGTGAGTCTC CCCCCGGACG AGCGGCTCAT CAATGGTCTC
TACGGCAGGC TTCCCATTTC TCGCGGTCAC TATGAAACCC TGGTGGTGCC TGCGGCCGCG
GTGCAACAGA GCGGCCAGCT CGATTTCGTG CGCGTGGTGG GTGCGGACGG CGCAACGCGC
AGGCGCTTTG TCACTCTCGG CCGGCGACAA GAGGGCCTTG TCGAGGTTCT CACGGGTCTG
AAGGAAGGCG AGAAGGTTGT CGCGCCATGA
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| Protein sequence | MNKAQEDEKR RKVFRETLKA SGAVLILVLL MAWLAGGFLK KVRPGPAQPV APEPGVRMQA
VERRTFPTVV EQVGTVRSRA EARVSSRIIA QVREILVREG DSVVGADEKD GKPTVMARLD
DGDIQARLRQ AEAQLAAVGR AKEVSSARLG AARSQVEAVR ANREKAFSDY KRYAELKRDQ
AATGQQVEHA RALRNATEAQ LQGSIKEVQV ARGELERVEA QREHAEAAVA EARAMLDYTI
IRAPFSGKVI RKMVDVGDMA SPGQPLFLLE ARSAPELHAQ VTESLVPFLK TGQEFSIRID
ALDCSFPGVL SEIVPRSDPV TRTVQVKVSL PPDERLINGL YGRLPISRGH YETLVVPAAA
VQQSGQLDFV RVVGADGATR RRFVTLGRRQ EGLVEVLTGL KEGEKVVAP
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