Gene Sfum_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3370 
Symbol 
ID4458311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4134692 
End bp4136008 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content59% 
IMG OID639704142 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_847478 
Protein GI116750791 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG CCGTGATTGG AACCGGGTAC GTGGGGCTGG TGAGCGGTGC GTGCTTTGCT 
GAATTCGGAC ACGAGGTCAC CTGCATCGAT AACGATGAAG CGAAGATCGC CCGTCTTGAA
CAGAGAGAAA TACCGATTTA TGAACCGGGG CTGGATGTCC TGGTGAAAAA AAACCTCGAG
GCCAACAGGC TTGTGTTCTC GACGGGGTAT AGCCCGGGAG TGCCCGAGGC CGAAGTGGTC
TTCATTGCGG TGGGGACCCC CGCATCCCGC AGGGGGGACG GTTACGCGGA TCTGAGCTTC
GTGTATGACG CGGCGCGGCA GTTGGCCCCC TTTTTGAGCG ACTACACGGT CGTGGTGAAC
AAAAGCACGG TGCCGGTTGG AACGGCGCGC CAGGTGGCCA GGATCATGTC GGAGGCGAAT
CCCACGGCGA CCTTCGACGT GGCGAGCAAC CCGGAGTTCC TGAGGGAGGG TGCCGCCATA
AACGATTTCA TGCATCCCGA TCGGGTCGTG ATCGGCGTGG ACTCCACCAG GGCCGAGGAA
GTCCTCAAAG CGGTCTATCG CCCATTGTAC CTCATCGAGA CCCCTTTCGT GATAACCAGC
ATAGAAACGG CCGAATTGAC CAAGTATGCC GCCAACGCCT TTCTGGCCAC CAAGATCAGT
TTCATCAACG AGGTGGCCAA CATCTGCGAA GAGATCGGAG CGGATGTCCA GGATGTGGCA
AAAGGGATGG GCCTCGACGG GCGAATCGGG AAGAAGTTTT TGCATGCCGG CCCCGGCTAC
GGCGGCTCCT GCTTCCCGAA GGACACCCAT GCCCTGCTGC GCATCGCGCA GGAAAACGGA
GTGACTTGCC GCATCGTGGA AGCGGTGGTC GAAGTCAACG CGGCTCAAAA GGCCAGGATG
GCCAGGAAAA TAAGGAAAGC CCTGGGCGGC GATGAGGGGG GAAAGACCAT CGCCGTGCTG
GGCCTCGCAT TCAAACCCGA AACCGACGAC CTCCGCGACG CTCCCGCCTT GACCATTCTT
TCAACGCTGC TGGAGCATGG AGCCCGATTG CGCGCTCATG ACCCCCAGGC AATGCCGGAG
GCGGCGAAGG TTCTTCCCGG AGTGAAGTAT TGCTCGAGCC CGTACGAGGC TTGTGAAGGT
GCGGACGCTG TGGTTCTCCT GACCGAATGG AACGAGTACC GCGCTCTGGA CCTGATGCGC
ATCAAACAGT CGCTCAAGCA ACCCATATTC ATAGACCTTC GCAACGTTTA CAGGCCGAAG
GCGATGGCTC AGCTCGGTTT TGCCTACCAC AGCGTGGGAA GAGTGAAGGT TGGCTAG
 
Protein sequence
MRIAVIGTGY VGLVSGACFA EFGHEVTCID NDEAKIARLE QREIPIYEPG LDVLVKKNLE 
ANRLVFSTGY SPGVPEAEVV FIAVGTPASR RGDGYADLSF VYDAARQLAP FLSDYTVVVN
KSTVPVGTAR QVARIMSEAN PTATFDVASN PEFLREGAAI NDFMHPDRVV IGVDSTRAEE
VLKAVYRPLY LIETPFVITS IETAELTKYA ANAFLATKIS FINEVANICE EIGADVQDVA
KGMGLDGRIG KKFLHAGPGY GGSCFPKDTH ALLRIAQENG VTCRIVEAVV EVNAAQKARM
ARKIRKALGG DEGGKTIAVL GLAFKPETDD LRDAPALTIL STLLEHGARL RAHDPQAMPE
AAKVLPGVKY CSSPYEACEG ADAVVLLTEW NEYRALDLMR IKQSLKQPIF IDLRNVYRPK
AMAQLGFAYH SVGRVKVG