| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3360 |
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| Symbol | |
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| ID | 4457642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4116263 |
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| End bp | 4118191 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639704132 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_847468 |
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| Protein GI | 116750781 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACAGC AATTGCGGAA TCCGAAATTT TACTCAATGC TCATCATTGA CGCATTTCTT
TTCGCCGTGG CCTATTACGG AGCCTACCTG CTCCGCTTTG AATTCACTCT GCCTCCCAAT
CACCTGCCCC TCATCAATGC TCTCGTTCCT TGGGTCGTCG GCATGAAGCT GGGCGTTTTC
TGCCTGTTCG GCCTCTACAG GGGGATGTGG CGGTTTTCGG GACTGGAGGA TTTCTGGCGT
CTGGGACAGG CGTCCGTTCT TTCCATGCTT CTGATTGTCG CTACGGTGGC TTACACTGAC
AACTTCACCG GATATCCCCG ATCCGTCTTT CTTCTGGACT GCGTTTTGAC GTTTCTGCTG
ACCGGCGGTC TGCGTGTATG CATTCGGTCC TACTATATCG CCAGGAATAC GCCGCGGGGG
ATCCGGGCAT TCTCCCTGCC CAGGCTGAAT TACGTTGAGA AAGAGCGCAA GCAGATTCTC
ATCATCGGCG CCGGCGGGTC GGGAGAAAAG ATGCTCCGCG AGATCTTCGA CAATCCGCAG
CTCCATTATC ACGTGGTCGG GTTCCTGGAC GACGATCCGG GCAAGCGGGG CCGCACGGTG
CATGGGGTGC GGGTACTCGG GCCCGCGGAC CATTTGTCCA GAGTCCTGGA GCAGAACAAT
ATCGAACAGG TATTTATCTC GGTACCTTCC GCGACCGGAG CTCAGATGCG CCGGCTCATC
GATATCTGCA AGGGATGCGG GATTTCCTAC AAGACGCTTC CCGCCATCGG TTCGATCATG
AACGGCAACG TGAGCATCAA GTCTCTGCGG GACGTCAATT ACGAGGATTT GCTGCGCCGT
CCTCCGGTCA GCCTGGAAAC CGATGCCATC TCAGGCTACC TGACCAACCG CACGGTAATG
GTGACGGGGG CGGGCGGGTC CATCGGCTCC GAACTCTGCC GCCAGGTCGC CCAGTTCAAG
CCGCAGTTGC TGATCCTGGT CGATGCCAGC GAGTCCAACC TGTTCCATAT GCAGATGGAA
TTGCAGCATG AGAGGGAATT TCGCAACTAT CAGTGTATCT TGGGTCAGGT GCAGCAGCGT
CTGCTGATGG AGAGCGTGTT CCGGAAGTAC CGCCCGGACG TGGTGTTCCA CGCCGCGGCT
TACAAGCACG TCCCGATGCT GGAAAGGAAT CCCTGGGAAG CCGTGTTCAA CAACGTGCGC
GGCAGCCAGG TAATGATGAA GCTGTCCAAG GATTACGGGG TGAAACGTTT CGTCCTGGTT
TCCACCGACA AGGCGGTCCG GCCGACGAAC GTGATGGGAA CCAGCAAGCG CCTCACGGAG
CTCATCCTGC AGTCCTTTCA GGGCAATGGG ACAAAGTACA TGGCCGTGCG ATTCGGCAAT
GTGGTCGGGT CCTCGGGTTC CGTCATTCCC CTCTTCCGCC GCCAGATCGA GCAGGGAGGC
CCGGTCACCG TGACTCATCC CGAGGTCACC CGGTACTTCA TGACGATTCC CGAAGCGGCT
CAACTCATCC TGCAGGCCGG AGCGCTCGGG GAAGGCGGAG AAATCTTCAT CCTGGAAATG
GGAACCCCGG TAAAGATCGC GGACATGGCA CAGGACCTGA TCCGGTTGTC GGGGAAGCAA
CCGGGCAGGG ACATTGAAAT CCAGTTCACC GGCCTGCGAG AGGGCGAGAA GCTTTACGAA
GAGCTGATCA CCCTCGATGA AGGCATCGTA AACACCAGGC ACGAAAAGAT CCTGGTGCTG
CGCCCCAACG GAAATGGAAA CGGCAACGGC CATCATGCGG GAAACCACGA TGCTTTTCGG
CAGTGGCTGG ATCGGGAATT GGAAGAGCTT TGCGCCATTG CGCGCAAGCA TGACTCATAC
GCCATCAAGC GCAAGCTCAA GCAACTGGTT CCGGAATACA CCCCCCAGGA TGCGGAGTGC
GTCCTGTAA
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| Protein sequence | MIQQLRNPKF YSMLIIDAFL FAVAYYGAYL LRFEFTLPPN HLPLINALVP WVVGMKLGVF
CLFGLYRGMW RFSGLEDFWR LGQASVLSML LIVATVAYTD NFTGYPRSVF LLDCVLTFLL
TGGLRVCIRS YYIARNTPRG IRAFSLPRLN YVEKERKQIL IIGAGGSGEK MLREIFDNPQ
LHYHVVGFLD DDPGKRGRTV HGVRVLGPAD HLSRVLEQNN IEQVFISVPS ATGAQMRRLI
DICKGCGISY KTLPAIGSIM NGNVSIKSLR DVNYEDLLRR PPVSLETDAI SGYLTNRTVM
VTGAGGSIGS ELCRQVAQFK PQLLILVDAS ESNLFHMQME LQHEREFRNY QCILGQVQQR
LLMESVFRKY RPDVVFHAAA YKHVPMLERN PWEAVFNNVR GSQVMMKLSK DYGVKRFVLV
STDKAVRPTN VMGTSKRLTE LILQSFQGNG TKYMAVRFGN VVGSSGSVIP LFRRQIEQGG
PVTVTHPEVT RYFMTIPEAA QLILQAGALG EGGEIFILEM GTPVKIADMA QDLIRLSGKQ
PGRDIEIQFT GLREGEKLYE ELITLDEGIV NTRHEKILVL RPNGNGNGNG HHAGNHDAFR
QWLDRELEEL CAIARKHDSY AIKRKLKQLV PEYTPQDAEC VL
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