Gene Sfum_3329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3329 
Symbol 
ID4458357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4077706 
End bp4079292 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content64% 
IMG OID639704101 
Productheparinase II/III family protein 
Protein accessionYP_847437 
Protein GI116750750 
COG category[S] Function unknown 
COG ID[COG5360] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGTG CTCTGCTCCC GTTTTCGCGG TTGCCCGGGC CCCTCGGGCC GCACCGGCTG 
CGGCCAAGAG CTTCGGAACC CGCGGCGGAG CTCCGGAGCG ACGGGTTCGA CGGTTCCGGC
TTCACTTTCT TGAACCGCAG GCTGCCGTTT TCCGGTCCCG AACGGTGGCG GCAGCCCGGT
GCGGACCGGT TGTGGACTTA CAATCTCCAC GCCTTTCGTT TTCTGAGCGG AATTCAGCCC
CGTGACGGCC TCTTTCTGGT TTTGGACTGG ATCGCGGAAA ACACCGATCC GAAAGGTCCG
GGATGGGAAC CCTATCCTCT TTCGATCCGC ATTCGGGAAT GGATCGAATG GGTTCACTCA
AACAGGGGTC TCGACGAAGC CGCCGCGCAT CGGATCGTGG GCAGCATCGC CCGTCAGACG
GCCGCGCTGG AGGCACAGAT CGAATATCAT CTCATGGGAA ACCATCTCCT GGAGAATGCC
GTCACGCTTT GCTGGGCCGG CTTGAGCCTG GACGGGGAGC GTGCGTCGAA ATGGGTACGG
CGCGGCCTGT CGATCCTCCG GGAGGAGTTG GCCACGCAGG TGCTTCCCGA TGGAGCACAC
GACGAGCGCA GCCCCATGTA CCAGGCGCTG CTTGCCGAAG CGCTGCTGCG GCTGGCCGGA
GTCGCGGACA AGGTCCGAAG CCGGGATGCG GACACCATCG GGCACCTGTC CCAATCGGCC
GGCACGAATC TGCTCGGTTC CCTGAGCCGG CTGGTCCATC CGGATGGCGA ATACGCGCTG
CTCAATGACT GCGCGCTGGG GGTGGCACCC ACTTACGGAG CATTGATCCA ACGGTTCATC
GCCGGGGGAG ACCCCGGGAT GGAGAACCTC GATACGCGCC TCGGCGCGTG GGCATTGGCC
GACGCGGGAT ATTTCGGGTG GCGGGATGGC TACGGCACCT GCCTCGTTTT CGATTCGGGA
CCGATCGGGC CGGACCATCA ACCCGGCCAC GGCCATGCCG ACGCTCTCTC GTTCGAGCTG
AGCCGCCGGG GCATGCGCGT GATCGCGGAT ACCGGCGTTT TCACGTACAA TCCGTGTTCC
GTCCGCCAAT ATGATCGCGG CACCGCCGCG CACAACACCA TCCAGGTGGA CGGCCGGGAC
CAGTCTGAAT TGTGGGAGTC TTTTCGCTGC GCGCGCAGGA TCTCGATCCG TTCCGCCGGC
ACAGGCTTCC GGGATGGTGG TCTCGAGTTG CATGGTTCCT GCGGAGGGCC GGGAAAAAGC
GGGCAGACCG TGATGCACAG CCGGAGCATT CGAATCGAAC CCCCGGTGAT CGGGTTTCAC
GACGAATTGA CCGCGCCGGG CAGACACCAG GCCGTCCTTC GGGTGCACTT GGCCCCCGGG
CTCACCTGTT CTCTCGACTC GGACGGCTGG AAAGCGGCGG CCGGTTCGGA GGCGTTGGCG
CGGGTGAGCG GCCGCGGTTT CTCTTTTGAT GCGACGACCA CTCCCTATCA CCCCCGTTTC
GGGGTGGAAA TCGATCGCCC GGCGCTTTCG GCCGCATTCG ATTTTCACGA TCGACTGGAA
CTGAACTGGT CCATACATCT GCTTTGA
 
Protein sequence
MARALLPFSR LPGPLGPHRL RPRASEPAAE LRSDGFDGSG FTFLNRRLPF SGPERWRQPG 
ADRLWTYNLH AFRFLSGIQP RDGLFLVLDW IAENTDPKGP GWEPYPLSIR IREWIEWVHS
NRGLDEAAAH RIVGSIARQT AALEAQIEYH LMGNHLLENA VTLCWAGLSL DGERASKWVR
RGLSILREEL ATQVLPDGAH DERSPMYQAL LAEALLRLAG VADKVRSRDA DTIGHLSQSA
GTNLLGSLSR LVHPDGEYAL LNDCALGVAP TYGALIQRFI AGGDPGMENL DTRLGAWALA
DAGYFGWRDG YGTCLVFDSG PIGPDHQPGH GHADALSFEL SRRGMRVIAD TGVFTYNPCS
VRQYDRGTAA HNTIQVDGRD QSELWESFRC ARRISIRSAG TGFRDGGLEL HGSCGGPGKS
GQTVMHSRSI RIEPPVIGFH DELTAPGRHQ AVLRVHLAPG LTCSLDSDGW KAAAGSEALA
RVSGRGFSFD ATTTPYHPRF GVEIDRPALS AAFDFHDRLE LNWSIHLL