Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3329 |
Symbol | |
ID | 4458357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4077706 |
End bp | 4079292 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639704101 |
Product | heparinase II/III family protein |
Protein accession | YP_847437 |
Protein GI | 116750750 |
COG category | [S] Function unknown |
COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCGTG CTCTGCTCCC GTTTTCGCGG TTGCCCGGGC CCCTCGGGCC GCACCGGCTG CGGCCAAGAG CTTCGGAACC CGCGGCGGAG CTCCGGAGCG ACGGGTTCGA CGGTTCCGGC TTCACTTTCT TGAACCGCAG GCTGCCGTTT TCCGGTCCCG AACGGTGGCG GCAGCCCGGT GCGGACCGGT TGTGGACTTA CAATCTCCAC GCCTTTCGTT TTCTGAGCGG AATTCAGCCC CGTGACGGCC TCTTTCTGGT TTTGGACTGG ATCGCGGAAA ACACCGATCC GAAAGGTCCG GGATGGGAAC CCTATCCTCT TTCGATCCGC ATTCGGGAAT GGATCGAATG GGTTCACTCA AACAGGGGTC TCGACGAAGC CGCCGCGCAT CGGATCGTGG GCAGCATCGC CCGTCAGACG GCCGCGCTGG AGGCACAGAT CGAATATCAT CTCATGGGAA ACCATCTCCT GGAGAATGCC GTCACGCTTT GCTGGGCCGG CTTGAGCCTG GACGGGGAGC GTGCGTCGAA ATGGGTACGG CGCGGCCTGT CGATCCTCCG GGAGGAGTTG GCCACGCAGG TGCTTCCCGA TGGAGCACAC GACGAGCGCA GCCCCATGTA CCAGGCGCTG CTTGCCGAAG CGCTGCTGCG GCTGGCCGGA GTCGCGGACA AGGTCCGAAG CCGGGATGCG GACACCATCG GGCACCTGTC CCAATCGGCC GGCACGAATC TGCTCGGTTC CCTGAGCCGG CTGGTCCATC CGGATGGCGA ATACGCGCTG CTCAATGACT GCGCGCTGGG GGTGGCACCC ACTTACGGAG CATTGATCCA ACGGTTCATC GCCGGGGGAG ACCCCGGGAT GGAGAACCTC GATACGCGCC TCGGCGCGTG GGCATTGGCC GACGCGGGAT ATTTCGGGTG GCGGGATGGC TACGGCACCT GCCTCGTTTT CGATTCGGGA CCGATCGGGC CGGACCATCA ACCCGGCCAC GGCCATGCCG ACGCTCTCTC GTTCGAGCTG AGCCGCCGGG GCATGCGCGT GATCGCGGAT ACCGGCGTTT TCACGTACAA TCCGTGTTCC GTCCGCCAAT ATGATCGCGG CACCGCCGCG CACAACACCA TCCAGGTGGA CGGCCGGGAC CAGTCTGAAT TGTGGGAGTC TTTTCGCTGC GCGCGCAGGA TCTCGATCCG TTCCGCCGGC ACAGGCTTCC GGGATGGTGG TCTCGAGTTG CATGGTTCCT GCGGAGGGCC GGGAAAAAGC GGGCAGACCG TGATGCACAG CCGGAGCATT CGAATCGAAC CCCCGGTGAT CGGGTTTCAC GACGAATTGA CCGCGCCGGG CAGACACCAG GCCGTCCTTC GGGTGCACTT GGCCCCCGGG CTCACCTGTT CTCTCGACTC GGACGGCTGG AAAGCGGCGG CCGGTTCGGA GGCGTTGGCG CGGGTGAGCG GCCGCGGTTT CTCTTTTGAT GCGACGACCA CTCCCTATCA CCCCCGTTTC GGGGTGGAAA TCGATCGCCC GGCGCTTTCG GCCGCATTCG ATTTTCACGA TCGACTGGAA CTGAACTGGT CCATACATCT GCTTTGA
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Protein sequence | MARALLPFSR LPGPLGPHRL RPRASEPAAE LRSDGFDGSG FTFLNRRLPF SGPERWRQPG ADRLWTYNLH AFRFLSGIQP RDGLFLVLDW IAENTDPKGP GWEPYPLSIR IREWIEWVHS NRGLDEAAAH RIVGSIARQT AALEAQIEYH LMGNHLLENA VTLCWAGLSL DGERASKWVR RGLSILREEL ATQVLPDGAH DERSPMYQAL LAEALLRLAG VADKVRSRDA DTIGHLSQSA GTNLLGSLSR LVHPDGEYAL LNDCALGVAP TYGALIQRFI AGGDPGMENL DTRLGAWALA DAGYFGWRDG YGTCLVFDSG PIGPDHQPGH GHADALSFEL SRRGMRVIAD TGVFTYNPCS VRQYDRGTAA HNTIQVDGRD QSELWESFRC ARRISIRSAG TGFRDGGLEL HGSCGGPGKS GQTVMHSRSI RIEPPVIGFH DELTAPGRHQ AVLRVHLAPG LTCSLDSDGW KAAAGSEALA RVSGRGFSFD ATTTPYHPRF GVEIDRPALS AAFDFHDRLE LNWSIHLL
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