Gene Sfum_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3324 
Symbol 
ID4458352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4070533 
End bp4071609 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content60% 
IMG OID639704096 
Productnucleotidyl transferase 
Protein accessionYP_847432 
Protein GI116750745 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.181413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTGG TGATCATGGC GGGCGGTTCC GGAACGAGGT TCTGGCCTGT CAGCCGTAAG 
GCGCGGCCCA AGCAACTGCT GAGCATTATC GGCGATCAGC CGATGGTCAA GGCGACTTAC
GAGCGGATCA AAGGGCTCGT GCCCGATTCC CGGATCATTC TGGTGGTGGG TCGTGAGCAT
TTCGACGAAA CGAGCCGACT CTTCTCGGGA ACCGAAGTTC GCATCCTGGC GGAGCCCCAG
GGAAAAAACA CGGCACCCTG CATAGGGCTG GCCGCGAGAT ACGTGGAATA CCTCGCCGGC
AATGCCCCAA TGGTGATCCT CCCCGCGGAC CACTTCGTCG CTCGGCCCGC TGTTTTCAGA
ACCGCGCTCA TGCATGCCGT ATCACTCTCG GCCGACGACA GGGCCATCTT CACTCTCGGC
ATCGTGCCCA CACGACCTGA AACGGGTTAC GGGTACATCG AGACGGACCC GGTCGAACGG
AACGCCGACG GGGTCGCGTT CCATCGGGCC AAACGGTTTG TGGAAAAACC TCCTCTCCAC
AAGGCGGAGG AATACCTGCT CGGAGGCGGC ACCTACTGGA ACGCCGGTAT CTTCATTGCC
ACATCCTCCC TTCTGCTGGC GGAATTCTCG GAGCATATGC CCGCGTTTCA TTCGGGACTG
ACCGGGTTGA CCGGGTTTGA CTCGGACGAA CATGCTCAAC GGTTGGCTTC GCTCTACGAA
GGAATCGACG GCATCTCTTT CGATTACGCG ATCATGGAGA AAACCGGCCG GACCGTCTAT
GTGCTTCCCT GCGACTGCGG CTGGAGCGAC GTTGGCTCAT GGTACAGCCT CTACGAAACG
CGGCGGGCGG AACAGGACGA GGCGGGAAAC CTGGCCGAGG GAGACGCGAT GCTCATCGAC
TGCCGGGGTT CTTTCGTCAT GGCCCGGGGC AACAGGCATG TGGCGGCACT GGGAGTCAAG
GGGATTCTGA TCGTGGACAC CGAAGATGCG GTGCTCGTTG CGGACCTCGA AAAGACGCAG
GAAGTGAGGA AAGTGATCTC CGGCCTGAAG GACCGTTGCC TGAACAAGCT GCTTTGA
 
Protein sequence
MYVVIMAGGS GTRFWPVSRK ARPKQLLSII GDQPMVKATY ERIKGLVPDS RIILVVGREH 
FDETSRLFSG TEVRILAEPQ GKNTAPCIGL AARYVEYLAG NAPMVILPAD HFVARPAVFR
TALMHAVSLS ADDRAIFTLG IVPTRPETGY GYIETDPVER NADGVAFHRA KRFVEKPPLH
KAEEYLLGGG TYWNAGIFIA TSSLLLAEFS EHMPAFHSGL TGLTGFDSDE HAQRLASLYE
GIDGISFDYA IMEKTGRTVY VLPCDCGWSD VGSWYSLYET RRAEQDEAGN LAEGDAMLID
CRGSFVMARG NRHVAALGVK GILIVDTEDA VLVADLEKTQ EVRKVISGLK DRCLNKLL