Gene Sfum_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3315 
Symbol 
ID4458343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4056903 
End bp4057631 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID639704087 
ProductHAD family hydrolase 
Protein accessionYP_847423 
Protein GI116750736 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.354727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATG TTTTCGACGT GGGAGCCTCT TTTGAGCTTC AAGCGGTCAT ATTCGACTGC 
GACGGCGTGC TCGTCGACAG TGAACCCCTC CACTATCGGG CGCTCCAGGA GGTATTGAAA
CCCCTGGGCC TCGGTCACGA CTACGCCCGC TACCTGGAGC ACTACATCGG TTTCGATGAC
CGGGACGCTT TCCGGGAGGC CTTTCGAGAA GCCGGACGCG ACCTGGATGG GCGCACCCTG
GCCGAGCTCG TCGATGCGAA GGACGGAGCG CTGCGGAAAA TCGTCGCCGA TGGAGTGCCC
ACCTTTCCGG GGGTCATCGA ATTGGTCCGG GAGCTCCACA GCCACAATGT GCTTCTGGGT
GTGGCATCCG GTGCGCTGCG CCATGAAGTG AGCGCATTCG TGGCTTCCCT TGGGCTGCAG
GATTGTTTTT CGATCCTGGT CGCCGCCGAT GACGTGGAAC GGAGCAAACC CGATCCGCAA
ACCTACATCA AGGCCCTCGA CGAGGTCAGA GTCCTTGGCG GGCACGCTGT TCTCGACGCG
AGGAATTGCG TCGCCGTCGA GGATACTCCG GCCGGTATCC AATCCGCCAG AACGGCCGGC
ATGTATGTTG TAGGGATCAC CAATTCCTTC CCGCGGGGGA GCCTCGAGGA TGCAGACCAC
ATTGTCGGGA GCCTGTCGGA GCTCGACCAT GCCGGCCTGA TTCGACTGGT CCGAACCGGA
AGGTCCTGA
 
Protein sequence
MQNVFDVGAS FELQAVIFDC DGVLVDSEPL HYRALQEVLK PLGLGHDYAR YLEHYIGFDD 
RDAFREAFRE AGRDLDGRTL AELVDAKDGA LRKIVADGVP TFPGVIELVR ELHSHNVLLG
VASGALRHEV SAFVASLGLQ DCFSILVAAD DVERSKPDPQ TYIKALDEVR VLGGHAVLDA
RNCVAVEDTP AGIQSARTAG MYVVGITNSF PRGSLEDADH IVGSLSELDH AGLIRLVRTG
RS