Gene Sfum_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3285 
Symbol 
ID4458383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4023370 
End bp4024290 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content60% 
IMG OID639704057 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_847393 
Protein GI116750706 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATT GGGTTTTTCT CTTCCCCGGC CAGGGTTCCC AGTATGTGGG CATGGGGCGG 
GAGTTCTACG AAAATTACAG CGAGGTCCGG GAGTTGTTCT CACAGGCGGG CGAGATCCTC
GAGATGGACA TCGCGAAGCT GTGTTTTGAA GGACCGGAGG AAATCCTGGT GCTGACGGAC
AACGTTCAGC CCGCCGTTAC CGTTGTGAAC CTGGCCTGTT TTACCGTGCT GCAGCTTCAT
GAAATCTATC CGATGGCCGC GGCCGGTCAC AGCCTCGGAG AGTACAGCGC CCTCTTTGTC
GCCGGAGTGC TCGATCTCAA GGATGTCTTG AATCTCGTCA GACGGCGCGG CATTTTCATG
CAGGAAGCCG CGGATGAGGA GCCGGGGTCG ATGGCGGCCA TCATGGACCT CGATCAGGGC
AAGCTCAAAG AGATCTGCGA TACCTGCGGA GTCGAGGTGG CCAACGTCAA TTGCGCCGAA
CAGACCATCA TCACCGGGCA CGTGGACCCC GTGGAGCGGG CGATTTCCCT GAGCACGGAA
GCCGGCGCGA AGATGTGCGT GAAACTGAAC GTGAGCGGTC CATGGCACAG CCGCTGCATG
ACGTCGGCCC GTAACAGGTT TGAACCTCAT GTGCGCCGGT GCACGTTCCA CGACCCTCAG
ATCCCGGTCA TCAACAACGT GGATGCCGCT CCGCTCCAAA GCGCCCAGGA GGCTCCCGGG
AAACTGATCG ACCAGATCTG CAGCCCGGTG CTCTGGCAAC AGTCGATGGA AAGCCTCATC
GCCGCGGGGC ATGACCACTT CGTCGAGGTG GGTCCCAAGA AAGTACTGCG GGGCCTGATG
CGCCGCATCA ACCGCAACGT CAAGGCGCTC AACGTCGAGG ACTCGGCAAG CCTGGCCGCT
TTTCTGCAAG CCAACCGGTA A
 
Protein sequence
MKDWVFLFPG QGSQYVGMGR EFYENYSEVR ELFSQAGEIL EMDIAKLCFE GPEEILVLTD 
NVQPAVTVVN LACFTVLQLH EIYPMAAAGH SLGEYSALFV AGVLDLKDVL NLVRRRGIFM
QEAADEEPGS MAAIMDLDQG KLKEICDTCG VEVANVNCAE QTIITGHVDP VERAISLSTE
AGAKMCVKLN VSGPWHSRCM TSARNRFEPH VRRCTFHDPQ IPVINNVDAA PLQSAQEAPG
KLIDQICSPV LWQQSMESLI AAGHDHFVEV GPKKVLRGLM RRINRNVKAL NVEDSASLAA
FLQANR