Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3271 |
Symbol | |
ID | 4458404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4007513 |
End bp | 4009870 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639704043 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_847379 |
Protein GI | 116750692 |
COG category | [S] Function unknown |
COG ID | [COG4951] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.581193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGGAG CAGGGCCGGA CCGGCCGCCG GATGCGACGT TGCATGACGA TCCTCGGTCC GAGCCGGCGT CGAAGGTCAC CGATCAATCG CCGGCGGAAG AGAAGATCGC TCTTTTCAGG AGCCTTTTCA GGGGCCGGGA GGACGTCTAT CCCAAGCGAT TCGAGAGCCG CAAGACCGGC AAGTCGGGGT ATCTTCCGGC ATGCCGCAAC GAATGGATCA AGCCCCGGTG CCGAAAACCC CGCGTGCGGT GCGGCGAGTG CCCGAACCGC GAATTTCTTC CCGTCACCGA CGAGGTGGTG GGGAATCACC TGCTCGGAGG CGAGCGGCAG GGAAGATCGA AGCGGGACTT CACCATCGGG GTCTACCCCT TGCTTCCGGG CGAGTCCTGC CGGTTCCTTG CCGTCGACTT CGACAAGAGC GGCTGGCGGG AGGACGCGGC GGCGTTCCTG AAGACTTGCG CGGACTTCGG CGTCCCGGCC GCCCTGGAGC GTTCGCGTTC CGGGAACGGC GGCCACGTCT GGATATTCTT TACTGCGCCC GTGGACGCCG GGACGGCGCG CCGGATGGGC TCTTTTCTGC TCACGGAAAC CATGGAGTCC CGGCCCGAAA TGGGCCTCGA CTCCTACGAT CGATTCTTCC CGAGCCAGGA CACTCTTCCC AAAGGGGGGT TCGGCGGCCT CATCGCTCTT CCCCTGCAGC GCCGGCCGCG CGAGACGGGC AACAGTGTAT TTGTGGATGA GGCCTTCGTT CCCTTCCCCG ACCAGTGGGC ATACCTTTCC TCCGTGCGGC GCATGGAGCC GGGCGAAGTG GAAAACCTCG CCCAAAAAGC CGTCGCGGGC GGGCGCGTGA TGGGGGTGCG CACGGTCGTA ACGGACGAGG ACGATGATCC TCCCTGGACG CTCCCCCCCT CGGGGCGCCG GAAGGAGCTT CCCCTTCCGG GACCGCTCCC GCCGAGCGTT ACGCTCACCG TCGCAAACCA GGTCTACGTG GCGAAGGAAG GGCTCCCCCC CGCGTTGAGA AACCGGTTGA TCCGCCTGGC GGCCTTTCAG AATCCGGAGT TCTACAAGGC TCAGGCCATG AGGCTGCCCA CCTTTCAGAT ACCGAGGGTC ATCGGGTGCT GCGAAGATTT TCCGGACCAC CTGGGCCTTC CAAGGGGATG CCTGGAGGAG ACGGCGGCTT TCCTGTCTTC GATCGGAATC GCACCGGTCG TGGTGGACGA GCGGTTTGGG GGCATTCCCA TCGACGTCCG GTTCACCGGC ACGCTGCGAC CCGACCAGGA GCCGGCCGCC CGCGCCATGC TGGAACACGA CACGGGAGTG CTCTCGGCGA CGACGGCCTT CGGCAAGACC GTGGTGGCAG CCCGTCTCAT CGCCGACCGC GGGGTGAATA CGCTGGTGCT GGTCCACCGG CGGGAGCTTC TCGATCAGTG GGGCGCCCGA TTGGATGAAC TGTTGGAGCT GCCCTCCGGG CGGATCGGAC GGATCGGCGG CGGGAAGCGC GATCCGACCG GGATTGTGGA CGTCGCGATC ATCCAGGGCC TCGTCAGAAA GGGCGTCGTG GCCGACCTGG TCGCGGAATA CGGGCACCTG GTCGTCGACG AATGCCACCA TATTTCCGCC CGCAGCTTCG AAACCGTCGC CCGCCAGTGC AGGGCGAAAT ACGTCACGGG GCTGTCCGCC ACGGTCACGC GCAAAGACGG CCATCATCCC ATCATCTTCA TGCAATGCGG GCCGGTCCGG CACCACGTGG ACGAGCGACG GCAGGCCGCC GCCAGGCCTT TTTGCCACAG GGTGATCCCG CGTCAAACGG AATTCCTCCT GCCCGGCGCT CTCAGGCGTG AAACCGATCC GGCCATCCAT GAAGTCTATG CGGCGCTGGT CCGGGACGAA AACCGAAACG GGATGATCGT CCGGGATGTG CTCGATGCCG TCGCAGCCGG GCGATTTCCG GTGATCCTGA CGGAGCGCCG GGAACACCTG TCCCTGCTTG CGCAACGTCT TGTCCCGCAG GTCCGAAACG TCGTCGTCCT GCAAGGCGGC ATGGGGAAAA AGCAGCGGGC GGCGGCGGCG AAAGCCCTTG CCGGGAGCGC CGAAGGGGAG GCGAGGGTGA TCGTCGCCAC GGGCCGGTAC CTGGGCGAAG GGTTCGACGA CGCCCGTCTG GATACCCTGT TCCTTGCCCT GCCGGTATCC TGGCGCGGAG TGCTCGTCCA GTATGCGGGG AGGCTGCACC GGCTCCACGA GCAAAAGAAG GACGTCCTCA TCTACGATTA CGCCGACCTG CGGGTGCCCA TGCTGGCACG AATGTACGGC CGCCGGCGCA TGGGCTACCG CAAAATCGGC TATGCGATCC AGGAATGA
|
Protein sequence | MEGAGPDRPP DATLHDDPRS EPASKVTDQS PAEEKIALFR SLFRGREDVY PKRFESRKTG KSGYLPACRN EWIKPRCRKP RVRCGECPNR EFLPVTDEVV GNHLLGGERQ GRSKRDFTIG VYPLLPGESC RFLAVDFDKS GWREDAAAFL KTCADFGVPA ALERSRSGNG GHVWIFFTAP VDAGTARRMG SFLLTETMES RPEMGLDSYD RFFPSQDTLP KGGFGGLIAL PLQRRPRETG NSVFVDEAFV PFPDQWAYLS SVRRMEPGEV ENLAQKAVAG GRVMGVRTVV TDEDDDPPWT LPPSGRRKEL PLPGPLPPSV TLTVANQVYV AKEGLPPALR NRLIRLAAFQ NPEFYKAQAM RLPTFQIPRV IGCCEDFPDH LGLPRGCLEE TAAFLSSIGI APVVVDERFG GIPIDVRFTG TLRPDQEPAA RAMLEHDTGV LSATTAFGKT VVAARLIADR GVNTLVLVHR RELLDQWGAR LDELLELPSG RIGRIGGGKR DPTGIVDVAI IQGLVRKGVV ADLVAEYGHL VVDECHHISA RSFETVARQC RAKYVTGLSA TVTRKDGHHP IIFMQCGPVR HHVDERRQAA ARPFCHRVIP RQTEFLLPGA LRRETDPAIH EVYAALVRDE NRNGMIVRDV LDAVAAGRFP VILTERREHL SLLAQRLVPQ VRNVVVLQGG MGKKQRAAAA KALAGSAEGE ARVIVATGRY LGEGFDDARL DTLFLALPVS WRGVLVQYAG RLHRLHEQKK DVLIYDYADL RVPMLARMYG RRRMGYRKIG YAIQE
|
| |