Gene Sfum_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3252 
Symbol 
ID4458420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3982541 
End bp3983116 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content60% 
IMG OID639704024 
Productrubrerythrin 
Protein accessionYP_847360 
Protein GI116750673 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.63877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGGC TGAACGGAAC GCAAACGGAG AAGAACCTGC TCATGGCGTT TGCCGGTGAG 
TCGCAGGCGC GCAATCGCTA CTCGTATTTC GCGGGACAGG CGCGCAAAGA GGGGTTGATG
CAGATTGCAG CCGTTTTCGA GGAGACCGCC AACCAGGAAA AGGAACACGC CAAGCGGTTC
TTTCAGTTCC TGGAAGGCGG GGAGGTTGCC GTCGCCGCGG CATTTCCCGC GGGAGTCATC
GGCGGCACCC TTGAGAACCT GAAAGCGGCC GCGGAAGGTG AGCACCACGA ACACGCCGAG
TTGTATCCGG ATTTTGCCCG GGTGGCCCAG GCGGAAGGTT TCCACAACAT CGCCAATGTC
TTTCATGCGA TTTCCGTTGC GGAGAAGCAG CACGAAAAGC GCTATCGGGA ACTGGCCGAA
AACATCGAAA AAGGCCGGGT GTTCAAGCGT GACGGCCATG TTGTCTGGCG CTGCCTGAAC
TGCGGCTACC TCCACGAAGC CCCCGAGGCT CCCACCACCT GTCCTGCGTG TTCTCACCCG
CAGAGTTTTT TCGAGCTGCT CGGAGAGAAC TGGTAA
 
Protein sequence
MGRLNGTQTE KNLLMAFAGE SQARNRYSYF AGQARKEGLM QIAAVFEETA NQEKEHAKRF 
FQFLEGGEVA VAAAFPAGVI GGTLENLKAA AEGEHHEHAE LYPDFARVAQ AEGFHNIANV
FHAISVAEKQ HEKRYRELAE NIEKGRVFKR DGHVVWRCLN CGYLHEAPEA PTTCPACSHP
QSFFELLGEN W