| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3244 |
|---|
| Symbol | |
|---|
| ID | 4458412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3973966 |
|---|
| End bp | 3975216 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639704016 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase, C terminal |
|---|
| Protein accession | YP_847352 |
|---|
| Protein GI | 116750665 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.71878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAA CATTCAATCC GTTCAGAATC GCCCAGCAGC AACTGGATCA CGCCGCGGAA
AGACTCGGGT TGGACGCGGC GACGCACGAG CTGTTGCGCT GGCCGATGCG TGAAATCAAG
GTGACGCTCC CGGTCAGAAT GGACGACGGA TCAACGAAGA TCTTTCACGC GTTCAGGGTT
CAATACAACA CCGCCAGGGG GCCCGCCAAA GGGGGCATCC GCTGGCATCC GCAGGAGACC
ATCGACACCG TCAGGGCCTT GGCCGCCTGG ATGACATGGA AGACCTCGGT TGTCGACATT
CCCCTCGGCG GCGGCAAGGG CGGCGTCATC TGCAATCCCA AGGAGCTGTC GGAAGCGGAA
AAGGAACGCC TCGCCCGCGC GTACATCCGC GCCGTCGCCG GGTCGCTCGG AGGCAGCAGG
GACGTGCCGG CGCCCGACGT ATACACGACT CCCCAGATCA TGGCCTGGAT GCTGGATGAA
TACGAAACGA TCCGGGGCGA GAATCACCCC GGCGTCATTA CCGGAAAGCC GATTCCGCTG
GGAGGCTCCC AGGGACGCAG CGACGCCACG GCGCGAGGGG GCATCTACGT CACGAGGGAA
GCCGCGGCGG CCTACGGCAT CGAGCTCAAG GGCGGAACCA TGGCCGTCAT GGGCTTTGGC
AACGTGGGCC ATCACGCGGC CCTCCTGGGC GAAGAGATCC TCGGCTTGAA GCTGGTGGCC
GCTTCCGATT CCAAGGGCGG GGTTGTCAAC CCCGCGGGCA TGGATGCCCG GGCGCTGGCC
GACCACAAGT CGAGGACCGG AGCCCTCAAA GGATTCCCAG GCACGGACGC GATCACCAAC
GACGACCTGC TGGGGTTGGA TGTGACGGTC CTGTTCCCGG CGGCCCTCGA GAACGCCATC
ACCCGGGACA ATGCGTCGCG GCTCCGCTGC CCGATGGTCT GCGAACTGGC CAACGGACCG
ACCGCGCCCG AGGCCGACGC GATCCTGGAC GCCAAGGGCA TCGTCGTGCT GCCGGACTTC
CTGGCCAATG CCGGAGGCGT GACCGTTTCC TACTTCGAAC AGGTGCAAAA CGCCTACAAC
TTCTACTGGG AACTCCAGGA GGTGCACCAG AGGCTCGACA GCAAGATGAC TCACGCGTTC
CGGAGCGTCC TTGAAATGAG CCGGCGCAAC CAGGTGCCTC TCCGCGAGGC AGCCTACCTC
GTGTCCGTAG CCCGAGTGGC CGAGGCATGC AGGCTGCGCG GCTGGGTCTG A
|
|---|
| Protein sequence | MDETFNPFRI AQQQLDHAAE RLGLDAATHE LLRWPMREIK VTLPVRMDDG STKIFHAFRV
QYNTARGPAK GGIRWHPQET IDTVRALAAW MTWKTSVVDI PLGGGKGGVI CNPKELSEAE
KERLARAYIR AVAGSLGGSR DVPAPDVYTT PQIMAWMLDE YETIRGENHP GVITGKPIPL
GGSQGRSDAT ARGGIYVTRE AAAAYGIELK GGTMAVMGFG NVGHHAALLG EEILGLKLVA
ASDSKGGVVN PAGMDARALA DHKSRTGALK GFPGTDAITN DDLLGLDVTV LFPAALENAI
TRDNASRLRC PMVCELANGP TAPEADAILD AKGIVVLPDF LANAGGVTVS YFEQVQNAYN
FYWELQEVHQ RLDSKMTHAF RSVLEMSRRN QVPLREAAYL VSVARVAEAC RLRGWV
|
|---|
| |