Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3215 |
Symbol | |
ID | 4458453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3937406 |
End bp | 3938320 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639703987 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_847323 |
Protein GI | 116750636 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.14574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCT TCATAACCGG AGGCACCGGA TTCGTCGGGA GCTATTTGAT TTCGAGGCTT GCCGACCTGG GACACGAAGT CACCACGGTT ACTCGTGGGG CGGCGGGGCG AACCCCGCGC AGCGGCGTTT CCTTCATCCA GGGGTCCACG ACGGCTCCCG GAGCCTGGCA GCAGGGCGTC GCCGGCCACG ACACGGTCAT CAACCTGGCT GGAGCCTCCA TATTCACCAG GTGGACGAAG GACGCCCGTC GGTCGATCAT CGAGAGCCGG GTGCTCACCA CCCGCAACCT GGTCGACGCC ATGGCCGCGT GCGATCCAAA GCCTCTTCTG CTCAGCACTT CCGCGGTCGG ATACTACGGA AGCCGTGAAG ACGATGCGAT CATTGACGAA ACCAGTCCCC CGGGGGACGA ATTCCTGACC CGCGTGAGTG TCGAATGGGA AGCGGAAGCA CGACGCGCCG AAGCCTTCGG CAGTCGTGTG GCGCTGTGCC GGTTCGGGAT CATCCTCGGC AGAGGCGGCG GGGCGCTTGC CAAAATGGCT CCGGCATTCA AATATATGGT CGGCAGCGTT CTTGGAAGCG GGAGACAGTG GTTCCCGTGG ATCCACCTGG AAGATGTCTT CCAGATCGTG CTTTTCCTGA TGGAGCGCCG GCACATCTCC GGCCCCGTCA ACTTCACCGC CCCCAATCCG GTCACCAATG AGGAATTGAG CCGCGAGCTG GCCCGGACTT TCGGCAAGCC GCTTTTCATG CCTGCCGTCC CGGCATTTGC CTTGAGGATC ATACTCGGGG AATTCGGCGA CGTGCTCCTC AAGGGGCAGC GGGCCATCCC CCGGCGCCTG TTGGACGAGG GCTACCGGTT TCGTTTTCCG GAGCTGCACG GGGCGTTGGC GGACCTGCTC CGGGATTCCC GGTGA
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Protein sequence | MKVFITGGTG FVGSYLISRL ADLGHEVTTV TRGAAGRTPR SGVSFIQGST TAPGAWQQGV AGHDTVINLA GASIFTRWTK DARRSIIESR VLTTRNLVDA MAACDPKPLL LSTSAVGYYG SREDDAIIDE TSPPGDEFLT RVSVEWEAEA RRAEAFGSRV ALCRFGIILG RGGGALAKMA PAFKYMVGSV LGSGRQWFPW IHLEDVFQIV LFLMERRHIS GPVNFTAPNP VTNEELSREL ARTFGKPLFM PAVPAFALRI ILGEFGDVLL KGQRAIPRRL LDEGYRFRFP ELHGALADLL RDSR
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