Gene Sfum_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3182 
Symbol 
ID4458489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3903822 
End bp3904760 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content60% 
IMG OID639703954 
Productriboflavin biosynthesis protein RibF 
Protein accessionYP_847290 
Protein GI116750603 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0196] FAD synthase 
TIGRFAM ID[TIGR00083] riboflavin kinase/FMN adenylyltransferase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.260327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT TTCGCGGATT GGAGAATATC CGCCAATCCC TCAACAACCC CGCTATCACC 
ATCGGCAATT TCGACGGCGT GCACCGAGGC CACCAGGCCC TCTTCGACAG AGTCAAGGAA
TGGGCGAAAC GACTGGGCGG GAAGTCGGTC GTCATGACTT TCGATCCGCA TCCCGTCGAA
GTCCTGTTCC CCAACAAGAA CCTTCAATTC ATCACGTCCC AGGAACGAAA GCTGGAGCTC
ATTTCGGCGT CCGGCATCGA TGCCGCCATC GTCGTTCCCT TCAGCAGGGA GTTCTCCCGG
ATTTCGGCGC GGGGATTTGT GGAAGACCTG CTGGTCGGCC GGATCGGGAT AAAGGCCCTC
GTCGTCGGCC ACGATTACCG GTTCGGATAC AGCCGTGAAG GCGATATCGT TCTGCTCAAG
GAACTGGGCA GGGAATTCGG ATTCGAAGTC GAGACGCTGT CGGGGGTGCG CCTGGACGAC
ACCGTCGTGA GCAGCACGGT GATCCGTCAG CTCATCCTCA AAGGGGAGAT GAAGCGGGCC
AACCGCCTCC TGGGGCGTTG CTATGAAATC GACGGCATCG TGGAAGTCGG CCGCCAGCGG
GGAGGCCGGC TGCTCGGGTT TCCCACCGCC AACATCCGCA TGTCCAGCCA GGCCCCGCCG
CGAACGGGCG TCTATATCGT CGAAGTCGAA GTCAACGGCA CCCGCTACCG CGGCGCCGCC
AACCTCGGCT ACAATCCCAC CTTCGGCGAT ACGGACCTGT CCCTGGAGGT GCACATCTTC
GACTTCAGCC GCAACATTTA CGGAGAATCC ATCAAGGTCT GGTTCCTGGA CCGGATCCGC
GATGAAAGAC GATTCGCCGG ACCGCAGGAA CTGGCCGACC AGATCAAGCT GGACGTCGCC
AGGGCAAGGG AATTCTTCGC CGACAGAAAA GCGGAATGA
 
Protein sequence
MEIFRGLENI RQSLNNPAIT IGNFDGVHRG HQALFDRVKE WAKRLGGKSV VMTFDPHPVE 
VLFPNKNLQF ITSQERKLEL ISASGIDAAI VVPFSREFSR ISARGFVEDL LVGRIGIKAL
VVGHDYRFGY SREGDIVLLK ELGREFGFEV ETLSGVRLDD TVVSSTVIRQ LILKGEMKRA
NRLLGRCYEI DGIVEVGRQR GGRLLGFPTA NIRMSSQAPP RTGVYIVEVE VNGTRYRGAA
NLGYNPTFGD TDLSLEVHIF DFSRNIYGES IKVWFLDRIR DERRFAGPQE LADQIKLDVA
RAREFFADRK AE