Gene Sfum_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3174 
Symbol 
ID4458514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3889133 
End bp3889954 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content58% 
IMG OID639703945 
Producthypothetical protein 
Protein accessionYP_847282 
Protein GI116750595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGA AAATCGCCGG AGCTGTCGGA CTCAAATACA ATCCCGTCGC CATCCTCCTG 
GCGGACGAGA AGCCGGACAA TGCCCTGCAG TTCAAGAAAG GAAAGTGGGG CTGCGTCATG
TTCATGTTCG CCAACGCCGC AAAGGGCAAG ACGGCGGCCT TCGACGCGCA GACCTATGGC
TGTTGGGGCG GCGGTGTCGG GCTTGGGTTC GGAAATACCT ATCTGCGCTT TCCAGGCGGT
GTTGAATGCT TTGCCCACTT TCTCTCATCC GGCAACGCCC GGTGGGAAAG GGGCAGGGAA
GTTGCCAAGT CCGTGGGAGA CGCTGCCGGA AAAGCGTTCA TGGAAAACTT CCTTGAGGGC
GAAGGCTATG TTAAGACACC CGAACTGGTG GAACAGTGGC TCGGGGAAAT TCCCATGAGG
GAAATCCAGG CCGGTTATGT ACTGTTCAAG CCCCTCTCGG AAATCGACCC CCAACGCGAG
AAGCCCGAGA CGGTGGTTTT TCTTGCCGAT CCGGATCAGT TGTCGGCGCT TGTCATTCTT
GCCAATTACG GCAGAGAGGG CATGGAAAAC GTAACGATCC CGTGGGCCGC GGGGTGCCAG
ACCATAGGAA TCCTCCCGTA CAGGGAGGCG AAATCGGGAA AGCCGAGAGC CGTTGTAGGG
CTGACGGACA TTTCGGCCAG GAAATACGTT CGCGGTCTTC TGGGCTCGGA ATACCTCTCA
TTCGGCATGC CCTGGGAAAT GTTTCTGGAA ATGGAGGGCA ACGTGGAGGG GAGCTTTCTG
GAAAGACAGC CCTGGCGGTC TCTCCTGGCG TCCAAGCCAT GA
 
Protein sequence
MESKIAGAVG LKYNPVAILL ADEKPDNALQ FKKGKWGCVM FMFANAAKGK TAAFDAQTYG 
CWGGGVGLGF GNTYLRFPGG VECFAHFLSS GNARWERGRE VAKSVGDAAG KAFMENFLEG
EGYVKTPELV EQWLGEIPMR EIQAGYVLFK PLSEIDPQRE KPETVVFLAD PDQLSALVIL
ANYGREGMEN VTIPWAAGCQ TIGILPYREA KSGKPRAVVG LTDISARKYV RGLLGSEYLS
FGMPWEMFLE MEGNVEGSFL ERQPWRSLLA SKP