Gene Sfum_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3173 
Symbol 
ID4458513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3888273 
End bp3889010 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID639703944 
ProductTetR family transcriptional regulator 
Protein accessionYP_847281 
Protein GI116750594 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACGA ATGTTCCAAA CTATTGTTCC AAACCGGCGC TCAAAACTAA CGTTTGTACA 
GCGGATAAAG AGATTTCCAT GCAGGATGGC CCGAAGAAAA GCGACGATAC GAAGGCGAGG
CTGATCGAGG CGGCTGGAGC GGTGTTTGCG CGGCAGGGAT TCCGATGGGC GACCGTCAGG
GAAATTTGCA GCCGTGCCGG CGCTCATGTG GGTTCCGTGA ACTACCACTT CCGGGACAAG
GAAGGACTCT ACGCGGCGGT CCTCGAGCAC ACGCAGCGAT CCGCCGTGGA AAAATACCCG
CCCGACTTGG GCCTCCGGGA GGGAGCCACA CCGCAGGAGA GACTCCGGGC ATTCGTTCAC
TCACTGCTGT CGCGCATCCT GGCCGAAGGG GTTCCGGCCT GGCACGGGAA GCTCCTTGCC
CGCGAAATCG CGGAACCGAC CGAAGCTCTG GACCGATTGC TGCAGAATTC GGTACGGCCC
CTTTTTTCGT ATCTGGCCGG CATAGTACGC GAGCTGCTCG AAGAAGCCGA CCCGCCGGAG
GGTGAGGAGA GCGATGTCGT TTTCCTGTGC CTGATGAGCA TCGTCGGACA GTGCCTGCAG
CATTACACGG CAAGACGGGC CATTGCCGTG CTTCGACCGA AGAGCTTCGA TCCGTCCGAC
ATCGAGCGTA TTGCGGATCA TATTTCGCGG TTCTCCATTG GAGGCATTCG AGAGCTCAGA
GCGGGGAAAT CACCCTGA
 
Protein sequence
MRTNVPNYCS KPALKTNVCT ADKEISMQDG PKKSDDTKAR LIEAAGAVFA RQGFRWATVR 
EICSRAGAHV GSVNYHFRDK EGLYAAVLEH TQRSAVEKYP PDLGLREGAT PQERLRAFVH
SLLSRILAEG VPAWHGKLLA REIAEPTEAL DRLLQNSVRP LFSYLAGIVR ELLEEADPPE
GEESDVVFLC LMSIVGQCLQ HYTARRAIAV LRPKSFDPSD IERIADHISR FSIGGIRELR
AGKSP