| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3170 |
|---|
| Symbol | |
|---|
| ID | 4458510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3885643 |
|---|
| End bp | 3886206 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639703941 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847278 |
|---|
| Protein GI | 116750591 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTGGA AAAAGATTGT GGCAATCGCC GGCAGCGTTG TCGGCCTGAA ACGCGGGGCT
GACGGTCGTT CCGACAGGGG GATCCTGGTT TTTCACCACA CCAGCGAGGT GATCCGGGCC
GAATCGCTGC TCAAGGAGGC GGGTTTCACC GTTTCCGTAA AGGGTCCGCC TCCAGACCTC
CGTACCGGGT GCGACCTGGT GATCGAATTC CCGCTGGTTT CCCAGTTGCG GATAGCGGAG
CTCCTGGGCG GGGCGAAGAT TGCCCCGCTC AAGATACTGC CGCTCCAGGA CCTGCTTCTG
GAACCCGTGG GTCTGTTTCA CGCCAAGGAT TTCGGCGATC ACCTCATGGT GCGGGCGGCC
AACATGAAGA TCACCATCGA CAAGAACGAT CTTCGCATTG TGAACGTTTC GGGCGGAGGC
TGCCCGGATG TGCCTTTCCT GGCGGAGAGC CTGGTGGGCA AGTCCCTGCT CGAGGCGCCC
GCGCCGCGCA GCATGGGCCA CACGCTGTGC GGATACGCTC TGCAGCTGGC TTACGAGGAA
CTTCTGCGCC GATGTCCTGG CTGA
|
|---|
| Protein sequence | MFWKKIVAIA GSVVGLKRGA DGRSDRGILV FHHTSEVIRA ESLLKEAGFT VSVKGPPPDL
RTGCDLVIEF PLVSQLRIAE LLGGAKIAPL KILPLQDLLL EPVGLFHAKD FGDHLMVRAA
NMKITIDKND LRIVNVSGGG CPDVPFLAES LVGKSLLEAP APRSMGHTLC GYALQLAYEE
LLRRCPG
|
|---|
| |