| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3166 |
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| Symbol | |
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| ID | 4458506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3882971 |
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| End bp | 3883699 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639703937 |
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| Product | ABC transporter related |
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| Protein accession | YP_847274 |
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| Protein GI | 116750587 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.631435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATCGAAA TCAGGAATCT CAGCCTGTGG TACCGCAAGG ATCACAAGGT GATCGACGAC
GTCTCGGCCC GCATCCCCAA GGGAAGGACG GTGGTGATCT GCGGTCCCAG CGGTTCCGGA
AAGAGTTCCC TGTTGAGGTG CATCAACGGG CTGGAGCGCT TCCAGGAGGG CGAAATCATC
ATCGACGGCC AGTCCTTGAG ATCACGCGAA ACCGATATCC ACAAGCTTCG GGCAAAGATC
GGCATGGTTT TTCAGCACTT CGAGCTCTAC CCGCACATGA CCGTGCTCGA CAACATCACC
CTGGCTCCTC GAAAGGTTTT GAACCAATCG GAAAAAGACG CTGAAAACAA GGCGATGCAG
CTCCTGACGC GCGTGGGAAT TCCCGACAAG GCCTCCAGGT ACCCGGGAGA GCTGTCCGGG
GGACAGCAAC AGCGGGTTGC CATTGCCAGG AGCCTGGCTA TGGAACCGAA AGCCATGCTC
TTTGACGAAC CGACTTCGGC CCTTGACCCG GAGATGATCA AGGAGGTCCT CGATGTCATG
ATCGATCTGG CAAAGAGCGG GATGACCATG GTTGTGGTCA CGCACGAGAT GGGGTTCGCC
CGGGAGGTGG CCGACGAAGT GGCGTTCATG GATCATGGGC GTTTTGTGGA ACGAAAGCCG
GCAGGAACGT TCTTTGAGTG CCCCGAAAAC CCGAGAACCA GGGAATTCTT GAGCAGGATA
TTGAAGTAG
|
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| Protein sequence | MIEIRNLSLW YRKDHKVIDD VSARIPKGRT VVICGPSGSG KSSLLRCING LERFQEGEII
IDGQSLRSRE TDIHKLRAKI GMVFQHFELY PHMTVLDNIT LAPRKVLNQS EKDAENKAMQ
LLTRVGIPDK ASRYPGELSG GQQQRVAIAR SLAMEPKAML FDEPTSALDP EMIKEVLDVM
IDLAKSGMTM VVVTHEMGFA REVADEVAFM DHGRFVERKP AGTFFECPEN PRTREFLSRI
LK
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