Gene Sfum_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3158 
Symbol 
ID4458498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3874970 
End bp3876256 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content62% 
IMG OID639703929 
Productradical SAM domain-containing protein 
Protein accessionYP_847266 
Protein GI116750579 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.271249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACC TTGACAAAGT GTTGCAGGAA GCGACCGGAG GAGCGGGAAT CATGCGGACG 
GAGGTGCCTG CCTCGAATTG CGGCCAAATC GAAGCCGGGT CCCGGAGAAG AAACCTGGTG
GTTTCGATGC TCCGTCACAC GATTCACAAT CCCCGGCACG TCATGACTCT CCTGCGCGGC
GAATATCGCC GGCACGTGGG AATTCGGATG GACCGCAGGC TGCATCCCGG AACCAGCGGG
CTCCCCGCCA ACATCAGCAT CAACCTCACC AGGCGGTGCA ATCTCAAGTG CGGCATGTGC
ATTCAGCATC GGCACGCCTC CCCGGCGGCA CCCGGGTTGA CCTGGTTTGA CCCGGAGCGG
GAATTGCCGG TGTCCGCATG GGTACGCCTG ATGGACCGGG TCACGACTTT CCGCCCCGCC
CTGTATGTGA CCGGCGGTGA ACCGATGTTG TATCCCGGCT TCGAGGAGTT CATCAAAGAG
GCCGGCAGGC GACACCTGTT CGTTCAATTG GCCACCAACG GAACGCTTCT TTCCGGAAAC
GCCGGGATGC TCGTGGAAGA GGGGGTGGGA ATCGTGATCG TCTCAATGGA CGGACCGGCC
CGCGTCCATG ACGAGGTGCG AGGCCGGCCC GGGCTTTTCC GGAGAACCTC CGACGGCGTT
CGTTCCCTGC TTTCGGCACG CGCGAGGCGG CGCAGCCCCA CCCCTGTTGT CGGCATCAAC
TTCACGATTT CCAAAACAAA TGTGGAATGC ATTCAGGACA TGGTTCCGAT CGCCCTGGAA
CTGGGGGTCG ATTTCCTGCA ATTTCAGCAC ACGATCTTCA GCTCGGCGGC CCACGTGGCA
AGACACAACC GGGTGTTTGC CCGCAAGGCG GCCGGATTGG GCGAGATCCA CCTGGTTCAT
CCCTCCATCC CGGAAGGGGA GTACTACGAG AGCGACATCG TCGAAGAAGA CGTGGGCCGT
ATCGCCGAAG GTCTCCAAAG GGCGAGAAAG GCGGCGCGCG GTCGCCTGCG GCTTTCTTTC
CTGCCCGATC TCTCCACCGG GATGCTCGAA CCTTACTACC TGGATTTGGA TCACCCTTTT
CCCGGCAAAT GCGACACGCT CTGGAAAACG CTCCGGATCA TGCCGGACGG CACCGTGTCC
CCCTGCCTTC ACGTCGTGGC GGGAAACGTC GCGCGGCAGT CAATCGATGA AGTATGGAAC
GGTCCCGGCA TGCAACGCTT CCGGGAACTG ATTGCCGGCC GGCTTTTCCC CGGATGCGCC
CGCTGCTGCA ACCGAAGCTT TTCCTGA
 
Protein sequence
MPDLDKVLQE ATGGAGIMRT EVPASNCGQI EAGSRRRNLV VSMLRHTIHN PRHVMTLLRG 
EYRRHVGIRM DRRLHPGTSG LPANISINLT RRCNLKCGMC IQHRHASPAA PGLTWFDPER
ELPVSAWVRL MDRVTTFRPA LYVTGGEPML YPGFEEFIKE AGRRHLFVQL ATNGTLLSGN
AGMLVEEGVG IVIVSMDGPA RVHDEVRGRP GLFRRTSDGV RSLLSARARR RSPTPVVGIN
FTISKTNVEC IQDMVPIALE LGVDFLQFQH TIFSSAAHVA RHNRVFARKA AGLGEIHLVH
PSIPEGEYYE SDIVEEDVGR IAEGLQRARK AARGRLRLSF LPDLSTGMLE PYYLDLDHPF
PGKCDTLWKT LRIMPDGTVS PCLHVVAGNV ARQSIDEVWN GPGMQRFREL IAGRLFPGCA
RCCNRSFS