Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3148 |
Symbol | |
ID | 4458523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3864134 |
End bp | 3864886 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639703919 |
Product | GntR family transcriptional regulator |
Protein accession | YP_847256 |
Protein GI | 116750569 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.275687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCGGA ATTCGGAACG GTTGGGAGTG AGACTGATGC AAATTCAGAA GAAAAACCTG AAAAGCGAAT TCGAGGGCTT GGTCGGCAAG CTGGAGAACA TGATTCTGAC CGGGGTCTTT CAGCCGCGGG AGCGGCTCAT CGAGCTGAAC CTGGCGAAGG CCCTGAATGT GAGCCGATTC TGGATTCGCG ACGCCCTGAA GATCCTCGAG ACCAAGGGCA TCGTCACCGT CATCCCGTAT AAAGGCGCGG TGGTCACCGA CCTGGATGAA GACGTGATTC AGGAGATCTT CGAAGTTCGG GTGGCCCTGG AAACCCTTGC CACCCGCCTG GCCTGCAATC ATGTCCGTCC CACGGACATC AGCGTCCTCA AGCGCATGGT CGGGCATGTG GAAGACAGCT ACACCCGGCG GGACTTCGAA ACCATGATCA CCGCCAACTC CAATTTTCAC GATTACATCT TCAAGCTGGC GAAAAACCAG ACGCTGCTCC AGATGATCAA CCAACTCAGA GCCCGGTGCC ACATCCTGCG CCACACGTCC TGGTCCTCGC AACGGATCGT GACCGAGATC CTCGAGGAAC ACCGTCAGTT TGTGGCGGCG CTCGAAAAGC GGGATCTCCA GGCGCTCGAA CGGTTGGCCC GGGATCACAT CACCCACGCC AAGGATTTCT ACCTGTTTCA GTTGCAGACG CGCAAAGCCC TGATCGGTAA TGCTTCACGC AAGAGGAAGA AAACGGGAGA AGTGCACAGT TAA
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Protein sequence | MGRNSERLGV RLMQIQKKNL KSEFEGLVGK LENMILTGVF QPRERLIELN LAKALNVSRF WIRDALKILE TKGIVTVIPY KGAVVTDLDE DVIQEIFEVR VALETLATRL ACNHVRPTDI SVLKRMVGHV EDSYTRRDFE TMITANSNFH DYIFKLAKNQ TLLQMINQLR ARCHILRHTS WSSQRIVTEI LEEHRQFVAA LEKRDLQALE RLARDHITHA KDFYLFQLQT RKALIGNASR KRKKTGEVHS
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