Gene Sfum_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3148 
Symbol 
ID4458523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3864134 
End bp3864886 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content57% 
IMG OID639703919 
ProductGntR family transcriptional regulator 
Protein accessionYP_847256 
Protein GI116750569 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.275687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGCGGA ATTCGGAACG GTTGGGAGTG AGACTGATGC AAATTCAGAA GAAAAACCTG 
AAAAGCGAAT TCGAGGGCTT GGTCGGCAAG CTGGAGAACA TGATTCTGAC CGGGGTCTTT
CAGCCGCGGG AGCGGCTCAT CGAGCTGAAC CTGGCGAAGG CCCTGAATGT GAGCCGATTC
TGGATTCGCG ACGCCCTGAA GATCCTCGAG ACCAAGGGCA TCGTCACCGT CATCCCGTAT
AAAGGCGCGG TGGTCACCGA CCTGGATGAA GACGTGATTC AGGAGATCTT CGAAGTTCGG
GTGGCCCTGG AAACCCTTGC CACCCGCCTG GCCTGCAATC ATGTCCGTCC CACGGACATC
AGCGTCCTCA AGCGCATGGT CGGGCATGTG GAAGACAGCT ACACCCGGCG GGACTTCGAA
ACCATGATCA CCGCCAACTC CAATTTTCAC GATTACATCT TCAAGCTGGC GAAAAACCAG
ACGCTGCTCC AGATGATCAA CCAACTCAGA GCCCGGTGCC ACATCCTGCG CCACACGTCC
TGGTCCTCGC AACGGATCGT GACCGAGATC CTCGAGGAAC ACCGTCAGTT TGTGGCGGCG
CTCGAAAAGC GGGATCTCCA GGCGCTCGAA CGGTTGGCCC GGGATCACAT CACCCACGCC
AAGGATTTCT ACCTGTTTCA GTTGCAGACG CGCAAAGCCC TGATCGGTAA TGCTTCACGC
AAGAGGAAGA AAACGGGAGA AGTGCACAGT TAA
 
Protein sequence
MGRNSERLGV RLMQIQKKNL KSEFEGLVGK LENMILTGVF QPRERLIELN LAKALNVSRF 
WIRDALKILE TKGIVTVIPY KGAVVTDLDE DVIQEIFEVR VALETLATRL ACNHVRPTDI
SVLKRMVGHV EDSYTRRDFE TMITANSNFH DYIFKLAKNQ TLLQMINQLR ARCHILRHTS
WSSQRIVTEI LEEHRQFVAA LEKRDLQALE RLARDHITHA KDFYLFQLQT RKALIGNASR
KRKKTGEVHS