Gene Sfum_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3079 
Symbol 
ID4458594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3788470 
End bp3789540 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content59% 
IMG OID639703850 
Producthypothetical protein 
Protein accessionYP_847187 
Protein GI116750500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000578583 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000119825 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCTCGGAC TCCAACCCCT CGCTTCAGCG ACTCTCGTGG GCAGTATGCC GCACAGAGAC 
CGCGGGAAGG TCATCGAACT GATCCTGCGG ACCGTGCCCG AAATCCCGGT GTGGCCCCAA
CTTCCGTCAT ATCCTTCCGA AGGGATGATG GTTCAGTACC TCGAGGGCCT GCCCGGCGTT
CATCGGGAAT CGGAACGCAC CTGCGTGCGA ACGGACACGG AGGAATTCGA CCGGGAACTG
TATGCTTTTT ACGAGGAATA CCTGGAGGTG GAGTCGGAGG CGAGAGCGCT TGAAGATTCC
CGCTTCAGGA TGGGCTCCGA AACCGGCGAA TCGTTTTTTC GGTTTCTGGA AATCCTCGGC
GGACATCGCG CGGGTCTCAA GGCGGTGAAG GGCCAGATCG TCGGCCCTTT TACCCTGCTT
GCCGGGATGA AAGACCAGCA GGACAGGGCG CTCCTCTATG ACGACCGGCT GCAGGACGCC
GTCGTGAAAC ACCTCGCCAT GAAAGCCAAA TGGCAGGTTG GCAGGCTGCG CGCGTTCGGC
TGTCCGGTGA TCGTTTTTCT CGACGAACCG GCACTGGCCG GGTTCGGTTC GTCGGCCTTC
ATCAGTGTCA CGCGGGAGCT CGTCCAGTCC CTCCTCAAGG AAGTGGTGGA CGCGGTGCAC
CAGGCGGGGG GGCTCGCCGG AATACACGTG TGCGCCAATA CCGACTGGCT CCTGGCTTTC
GAGTCGGGTG TCGACATCAT CAACTTCGAC TCTTACAAGT ACTTCGACAG GTTCGCACTG
TACGGAGATG CTTTCTCCAG GTTCATGGCG GACGGACGAC TCGTCGCCTG GGGGATGGTG
CCCACTCTGG ATAGAGGCGC GATCCTGGCT GAAAGCGCGC AAAGTCTCGC GGATAAATGG
TTTGCTCAAA TTCAACACTT GGTTACTCCC CAGTTGTCGA CTCAGACGAT CCTCGCACAG
TCCATTTTCA CCCCCAGCTG TGGGTGCGCA TGCCTGGAAG AATCCATTGC GGAACGAGTG
CTGGAACTTA CCGGTAGCCT CAGTGAGCTT ATGAAAGCGG CCTGTCGATG A
 
Protein sequence
MLGLQPLASA TLVGSMPHRD RGKVIELILR TVPEIPVWPQ LPSYPSEGMM VQYLEGLPGV 
HRESERTCVR TDTEEFDREL YAFYEEYLEV ESEARALEDS RFRMGSETGE SFFRFLEILG
GHRAGLKAVK GQIVGPFTLL AGMKDQQDRA LLYDDRLQDA VVKHLAMKAK WQVGRLRAFG
CPVIVFLDEP ALAGFGSSAF ISVTRELVQS LLKEVVDAVH QAGGLAGIHV CANTDWLLAF
ESGVDIINFD SYKYFDRFAL YGDAFSRFMA DGRLVAWGMV PTLDRGAILA ESAQSLADKW
FAQIQHLVTP QLSTQTILAQ SIFTPSCGCA CLEESIAERV LELTGSLSEL MKAACR