Gene Sfum_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3071 
Symbol 
ID4458586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3781030 
End bp3781926 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content58% 
IMG OID639703842 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_847179 
Protein GI116750492 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000126836 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTTCG CCTCCATCAA GGTTTGGCAA CGCAACCATC CGACAGGAGA GATTTCTCAG 
GCAATGATTC CATACCCGAA CATCAATCCG GAGATCGTCT CGTTCGGCCC GTTCAACCTG
CCGTGGCTCG GGGCCGTGGG CCCTATCAGC ATCAGGTGGT ACGGGGTGAT GTACGTCGTC
GGCTTCGTGA TGTCCTACGT TTTCATCCAG AAGCAGAAAC GATCGAAGGA AGTCGGACTG
GTGGGCACGG TGGCCCAGGA CCTGATTTTC TACCTGGCCG TCGGCCTGAT CATCGGTGCG
CGTCTCGGCT ACGTCGTTTT CTACGAGTTC AACAACTACG GCTATTACCT CAAGAACCCT
CTTGAAATCA TGGCCACCTG GCATGGCGGG ATGTCCTTTC ATGGGGGGCT CATCGGCGCT
GTCCTGGCCG CCTGGATTTT CAGCCGTCGC AGACGGGTCC CTTTCGGGGT GGTGGTGGAC
AGCACCACGG TCACTGTTCC CATCGGGCTG GGGTTCGGCC GCATCGGCAA TTTCATCAAT
GCGGAGCTGC TCGGGCTTCC GTCGAATGTT CCGTGGGCGA TGATCTTTCC CACGGGGGGG
CCCGTCCCGC GCCACCCCAC CCAGCTCTAC GAAGCCCTCC TGGAAGGCCT CGTGCTGTTC
GTCATCTTGT GGAACCTTCG CCGCAAACCC TTCCGGGACG GAATGATGCT CGTGTTTTTT
CTGTTCTTTT ACGGTCTCTT CAGGTTTATT CTGGAATTCT TCAAAGAGCC CGACCCGCAG
ATCGGTTATC TGCTGGGTTA TTTCACCATG GGCCATATCC TGTGTTTTTT CATGATCGTT
GCGGCCGTCA TCCTGGGTTT GTATCTCAAT CGAAGCGCGC CGGCGGCGCG AGCCTGA
 
Protein sequence
MEFASIKVWQ RNHPTGEISQ AMIPYPNINP EIVSFGPFNL PWLGAVGPIS IRWYGVMYVV 
GFVMSYVFIQ KQKRSKEVGL VGTVAQDLIF YLAVGLIIGA RLGYVVFYEF NNYGYYLKNP
LEIMATWHGG MSFHGGLIGA VLAAWIFSRR RRVPFGVVVD STTVTVPIGL GFGRIGNFIN
AELLGLPSNV PWAMIFPTGG PVPRHPTQLY EALLEGLVLF VILWNLRRKP FRDGMMLVFF
LFFYGLFRFI LEFFKEPDPQ IGYLLGYFTM GHILCFFMIV AAVILGLYLN RSAPAARA