| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3060 |
|---|
| Symbol | |
|---|
| ID | 4458610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3768402 |
|---|
| End bp | 3769238 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639703832 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847169 |
|---|
| Protein GI | 116750482 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.068223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCATT TTGACAGGGT CATCCCTCCC GGCGGCGAGG GCAAGGTACG ACTGAGAGTG
AGCTTGAAGG GATTCCAGGG CGAGATCAAG AAGAGCGCGG CCATATACAG CAGCGACGAA
CAGAATCCTC GCCTGGCTGT GAGCGTTCAG GGCGTGGTAA AGACCCTGAT CGAGGTCCGC
CCGAACACCG CCGTCACCTT CCGGGGAATG GCGGACCAGG TGTCCGAACA CGTTTTCGAG
CTGGTGAGCC AGGGGCAGCC GTTTCACATC ACCAAGGTCG AGACGAACCT GGAAGGCAAG
ATCGACTATA CGCTGGAAAA CATCGAGGAT GGAAAGTTCT ATAAGGTCAA GGTGGCGAAC
AAGCTCAGGC AGGGCAATTA CAACGGGTTC ATCAAGTGTC TGACGGACTT GCCACAGAAA
CCCGAAGTGG TGGTGCGCGT GAGCGGACTG ATCGAAGGAG AAGTCACTGT GAAGCCGCAG
ACCATCCTGA TCGGAAAACT GGCCGCACAG CAGCCTGAAC GCACCGGGAA GGTGGCGGTG
GCGAGCAATC GCGCCAAACC CTTCCATATC ACCAAGTTGA TCTACGATGA ACGGCTGATC
ACCGTCAGCC AGGCGCCGAT GGCTGACAAC GAACACGGCT ACACGCTTGA GATCGCCGCC
AGGCTGGGCA GCGTTCCAAC CGGAACGAGG CAGCAGACCT CCCTGGTGAT CGAGACCGAT
GCGGCGCCCC AGGAGAAACA GGAAATCCAG GTCCACGTCT TCAACACCGT GGACGGGACC
GCCCGCGTCC AAACCCCAAA GCCCCAGGTT CCACCGCAGC CGTCTGCCGG GCAGTAG
|
|---|
| Protein sequence | MAHFDRVIPP GGEGKVRLRV SLKGFQGEIK KSAAIYSSDE QNPRLAVSVQ GVVKTLIEVR
PNTAVTFRGM ADQVSEHVFE LVSQGQPFHI TKVETNLEGK IDYTLENIED GKFYKVKVAN
KLRQGNYNGF IKCLTDLPQK PEVVVRVSGL IEGEVTVKPQ TILIGKLAAQ QPERTGKVAV
ASNRAKPFHI TKLIYDERLI TVSQAPMADN EHGYTLEIAA RLGSVPTGTR QQTSLVIETD
AAPQEKQEIQ VHVFNTVDGT ARVQTPKPQV PPQPSAGQ
|
|---|
| |