Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3052 |
Symbol | |
ID | 4458637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3758528 |
End bp | 3759355 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639703824 |
Product | glutamate racemase |
Protein accession | YP_847161 |
Protein GI | 116750474 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.580902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGCCATG ACATGAATTT TGTGAAACCG GATTCCAACA GCGCCATAGG TGTTTTCGAC TCGGGAATCG GCGGGTTGAC CGTCGTTCGG GCCTTGATGG AAAGGCTCCC GTTCGAGAGT ATCATCTACT TCGGGGATAC GGCCCGGGTG CCTTACGGGG TGAAATCCGT CGACACCATA TCGAAGTTTG CCGGGGAGAT CACCGAGTTT TTGCTCCGGC AGCAGGTGAA GCTGCTGATC GTCGCCTGCA ACACCATGGC GGCCGTGGCC CGCGAGGTCA TCGTGGGGCT CTCGCCCGTT CCGGTCCTGG ACGTCATCGA TGCCGGCGCG AGCAGCGCGG TCGAGGCAAC TCGGGCCAGG TACGTGGGCG TCATCGGGAC TCCCGCCACG ATCAACAGCA ACGCCTACGC GCGGGCGATC CACCGCCATG ATGCCGGAAT TCGCATATTC TCGCAGGCGT GCCCCCTCTT CGTGCCGCTC GTGGAAGAAG GGTGGCTCGA TCACCCGGTA ACGCGGCTGA CCGCGCGGGA ATACCTGCGC CCCGTAACCA CTCACCAGAT CGATACGCTG GTCCTGGGCT GTACGCACTA TCCTCTGCTC AAACCCCTCC TGCAGAAAGT GGTGGGAAAG GACATCCATT TGGTCGACTC GGCCGAGGCC ATGGCCGAGC GGACCGCCGC GGTGCTCACT GAAATGGATC TGTGGAATCG AAGTGCTTCC CCCCCGGATT ACCGCTTCTT TGTCAGCGAT GTGCCCTTGC GCTTCCAGGG GATCGGCGAG CGGTTCCTTG GAAGGAGCCT GCCCAAGGTG CAGGTCGTGA AATGGTGA
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Protein sequence | MCHDMNFVKP DSNSAIGVFD SGIGGLTVVR ALMERLPFES IIYFGDTARV PYGVKSVDTI SKFAGEITEF LLRQQVKLLI VACNTMAAVA REVIVGLSPV PVLDVIDAGA SSAVEATRAR YVGVIGTPAT INSNAYARAI HRHDAGIRIF SQACPLFVPL VEEGWLDHPV TRLTAREYLR PVTTHQIDTL VLGCTHYPLL KPLLQKVVGK DIHLVDSAEA MAERTAAVLT EMDLWNRSAS PPDYRFFVSD VPLRFQGIGE RFLGRSLPKV QVVKW
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