Gene Sfum_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3025 
Symbol 
ID4458645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3730642 
End bp3731142 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID639703797 
Productacetolactate synthase, small subunit 
Protein accessionYP_847134 
Protein GI116750447 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.897404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.20881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAATCA GCGAAAAGCA GAGGTACACC ATAGGCATAC TGGTGCAGAA CGTACCGGGA 
GTTCTGGCTC GGGTGGTGGG ATTGTTCAGC GGCAGGGGCT ACAACATCGA GACCGTTACC
GCGGCCGAAA CCCATGAACC CGGCCTTACC CGCATCACCC TGGTGACGAC CGGGGACGAG
CGCGTACTGT CTCAGATCGT CAAGCAGTTG AACAAGCTGA TCAACGTCAT CAAGGTGTAT
GATTTCTCGG AAACGGAGTT CGTCGATCGT GAGATGGCGA TTATCAAGGT GCGGGCGGAA
CCGCCGACCA GGGCCGAAGT CCTGCGCATC GTGGATATTT TTCGGGCCAA GGTGGTTGAC
GTCAGTCCTC ACTTCTATAC GCTTGAGGTT ACCGGCAACG AGAGCAAGAT CCAGGCGATC
ATGGAACTGC TCGGCCAGAT CGGTATAGTG GAAGTGGCCC GCACCGGGAA AGCGGCGCTG
GCCCGAAGCA AGAAACATTG A
 
Protein sequence
MIISEKQRYT IGILVQNVPG VLARVVGLFS GRGYNIETVT AAETHEPGLT RITLVTTGDE 
RVLSQIVKQL NKLINVIKVY DFSETEFVDR EMAIIKVRAE PPTRAEVLRI VDIFRAKVVD
VSPHFYTLEV TGNESKIQAI MELLGQIGIV EVARTGKAAL ARSKKH