Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3023 |
Symbol | |
ID | 4458643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3726731 |
End bp | 3728416 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639703795 |
Product | acetolactate synthase, large subunit, biosynthetic type |
Protein accession | YP_847132 |
Protein GI | 116750445 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000478309 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.133355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGGTA TGGTTTTGGA GATCACCGTT GCAGAAGCGT TGATAAAGTG CCTCGAAAAG GAAAACGTGG AGGTGGTGTT CGGCTATCCG GGAGGGGCGA TCCTGCCGGT CTACGATGCT TTGTACCATT CTTCGCGTAT CAGGCACGTG CTGGTGAGGC ACGAGCAGGG AGCGGTGCAC GCCGCTGACG GATACGCAAG GGTCACCGGC CGGGTGGGGG TTTGCGTGGC CACCTCGGGG CCGGGGGCCA CCAACCTGGT CACCGGGATT GCCAACGCGT ACATGGATTC CATACCCCTT GTGGTTTTCA CCGGCCAGGT TCCCACCAGT CAAATCGGCA CGGACGCCTT TCAGGAGGTG GACATATTCG GCATCACCAT GCCGGTCACC AAGCACAACT ACCTGGTAAA GGATCCCCAG AGGCTGCCGG CCATCGTGAA GAACGCTTTC CATATCGCCT CCACGGGACG TCCGGGTCCG GTGCTGGTCG ATTTGCCCAA AGACGTGGCG CAGAGCGTGA TTTCGTTCAA GTACCCGGGC ACGGTGCGGC TGCGCGGGTA CAAGCCGACG TACCGCGGGC ACCCCGCGAA GATCGGTGAG ATCGCGGAAC TGATCCGCAA ATCCAAACGA CCGGTGATTT ACGCCGGGGG TGGGATCGTC ACCTCGGATG CGGCCGGGGA GCTGCTCCAG CTGGCGGAGA CCATTTCCGC TCCGGTGACC AACACTTTCA TGGGACTGGC CGGTTTTCCC GGGGACCACC CGCTCTTTCT CGGAATGCTC GGCTTGCACG GGACGCGTTA CGCGAATCTG GCCATCACCG AATGCGACCT GCTGATCGGC CTCGGAGCGC GGTTTGACGA CCGCGTCACC ATGAACATCA ATGCCTTCGC CCCTCAGGCT ACGGTCATTC ACATCGACAT CGACCCTGCC GAGATCGGCA AGATCGTCAA CGTGCACGTG CCCCTGGTGG GAGACGTGAA GACGGTGCTC CAGTCGCTTT TGCCGCAGCT GGAAAAGACG GATCGCTCGG CCTGGCTGGC CCGCATACGG GAGCTCAAGG AGCAGCATCC CCTTTCGTAC AGCCGGGAAG GCGGCCTGAA ACCCCAGTTC ATCATCGAAC AGCTGTGGGC CTGCACGCGG GGGAACGCTA TTGTGGCCAC GGACGTCGGC CAGCACCAGA TGTGGGTGGC TCAGTACTAC CGTTTCAAGT CCCCCCGCAC GCTGATTTCC TCGGGGGGAC TGGGGTGCAT GGGGTTCGGC CTTCCCGCGG CCATCGGCGC GAGCATTGGT CGGCCGAACG CGAAGGTTGT GCTGGTGACC GGCGACGGCA GTATCCAGAT GACCATGCAG GAGTTGGGCA CCATGATCGA ACAGGGTGTG CCGGCCAAGA TCATCATCCT GAACAACCAT GCCCTCGGCA TGGTGCGGCA GTTGCAAGAG TTTTACTGCG AAGGCCGTTA CATGTCGGTC AATTTCCGGT TCCACCCGGA TTTTGAAACG TTGGCCAAAG CCTATGGAAT TCCCGGGCAC ACGCTGCGAA CGGAAGAGGA GGTGACTTCC CGGCTTCCGG GGATAATTGA GGCCCCCGGA GCGGCCATTG TCAACTGCCT GGTCGCAGCC GAAGAAAACG TATCGCCCAT GGTACTTGCC GGAAAAGGGA TCCACGAGGC GATCGACTGC TCCTGA
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Protein sequence | MGGMVLEITV AEALIKCLEK ENVEVVFGYP GGAILPVYDA LYHSSRIRHV LVRHEQGAVH AADGYARVTG RVGVCVATSG PGATNLVTGI ANAYMDSIPL VVFTGQVPTS QIGTDAFQEV DIFGITMPVT KHNYLVKDPQ RLPAIVKNAF HIASTGRPGP VLVDLPKDVA QSVISFKYPG TVRLRGYKPT YRGHPAKIGE IAELIRKSKR PVIYAGGGIV TSDAAGELLQ LAETISAPVT NTFMGLAGFP GDHPLFLGML GLHGTRYANL AITECDLLIG LGARFDDRVT MNINAFAPQA TVIHIDIDPA EIGKIVNVHV PLVGDVKTVL QSLLPQLEKT DRSAWLARIR ELKEQHPLSY SREGGLKPQF IIEQLWACTR GNAIVATDVG QHQMWVAQYY RFKSPRTLIS SGGLGCMGFG LPAAIGASIG RPNAKVVLVT GDGSIQMTMQ ELGTMIEQGV PAKIIILNNH ALGMVRQLQE FYCEGRYMSV NFRFHPDFET LAKAYGIPGH TLRTEEEVTS RLPGIIEAPG AAIVNCLVAA EENVSPMVLA GKGIHEAIDC S
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