Gene Sfum_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3009 
Symbol 
ID4458664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3712062 
End bp3713411 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content61% 
IMG OID639703781 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_847118 
Protein GI116750431 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.858844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.073347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC TTTTCGATCA CGTCACTTTG TCCCGCATCC AGTTTGCGGT AACGGCCCAT 
TTCCACATTC TGTGGCCGGT TCTGACCGTG GGCCTCAGCA TTTTCCTGGT GCTGATGGAG
GCCCTCTACC TCAAGACCGG CGACAAACGC TATTACGATC ATTGCCGTTT CTGGACCAAG
CTTTTTCTGC TCAACTTCAG CATCGGCGTG GTCTCGGGAA TCCCCATGGA ATTCCAGTTC
GGCACGAACT GGAGCCCTTT TTCCGTCGCG GGCGGAGACT TCTTCGGGCA CATGCTCGGG
TTCGAGGCCG CCATGGCGTT CATGCTCGAA GCGACCTTCC TTGGGGTCAT GGTGTTCGGC
TGGAAGCGGG TTTCGCCGGG CATGCACCTG TTCGCGACCT CGATGGTGGC CCTCGGCGGC
TCTCTTTCCG CTTTCTGGAT CATGGTCGCC AACTCCTGGA TGCAGACTCC GACCGGCGGG
GTATTCGAGA ACGGGCGTTT CATCATCACC AGCAGACTTG ACGCCATCTT CAACCCGGAC
ATGCCCTGGG GCGTGTCCCA CATGTGGGTG GCCTGCCTGG AGGTTTCGCT CTTCGTGGTG
GGTGGGCTCA GCGCCTGGTA TATCCTCAAG AGGCGCCATG CGGCGTTCTT CCTGCAATCC
TTCAAGATCG CCGTCGTCGC GGCGGTTCTC GTCGCACCGC TGCAGATCCT CCTCGGGGAC
GGTTCGGGCA TCGCCGTTTT CCACCATCAG CCAGCCAAGC TTGCAGCCAT TGAAGCCCAC
TGGGAGACCA ACCCGCCGGG GCGGGGAGCC CCGGAACTGC TGATTGCGTG GCCCAACCAG
GAAGAACAGA AGAACGACTG GGCTATCGGT ATCCCCAACG GCTTGAGCCT GCTCGTGACC
CACAGTTGGA CCGGTCCGGT AAAAGGGCTG AAAGAATTCC CCCGCAGCGA CCAGCCACCG
GTGACGCCGC TCTTCTATGC CTTCCGAGTG ATGGTGGGGA TAGGCTTCCT GCTCTTCTTC
CTCGTGATCT GGACACTTTG GGCGTGGAAA CGGGGAGACC TCACCCCGGA TCGCCTGCCC
ACCCGCAAAT GGCTGCTCTA TTCATGGATC GGGGCAGTGC CTCTGAGCTA CCTGGCCATG
GAAACCGGAT GGATAACCCG GGAAATCGGG CGGCAGCCCT GGATTCTGTA CAATCTACTG
CGCACCTCGG ATGCCGCCAC CATGATCCCC GCCGCGACGG TCGGGACCTC GCTGCTCACG
TTCGCCATTC TTTACCCGCT GCTCTTCATC CTGTTCATGG GATTTGCGCG CAGAATCATC
GTCAAGGGGC CGGACACCCA CGCCGGCTGA
 
Protein sequence
MDTLFDHVTL SRIQFAVTAH FHILWPVLTV GLSIFLVLME ALYLKTGDKR YYDHCRFWTK 
LFLLNFSIGV VSGIPMEFQF GTNWSPFSVA GGDFFGHMLG FEAAMAFMLE ATFLGVMVFG
WKRVSPGMHL FATSMVALGG SLSAFWIMVA NSWMQTPTGG VFENGRFIIT SRLDAIFNPD
MPWGVSHMWV ACLEVSLFVV GGLSAWYILK RRHAAFFLQS FKIAVVAAVL VAPLQILLGD
GSGIAVFHHQ PAKLAAIEAH WETNPPGRGA PELLIAWPNQ EEQKNDWAIG IPNGLSLLVT
HSWTGPVKGL KEFPRSDQPP VTPLFYAFRV MVGIGFLLFF LVIWTLWAWK RGDLTPDRLP
TRKWLLYSWI GAVPLSYLAM ETGWITREIG RQPWILYNLL RTSDAATMIP AATVGTSLLT
FAILYPLLFI LFMGFARRII VKGPDTHAG