Gene Sfum_2990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2990 
Symbol 
ID4458680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3692465 
End bp3693484 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content62% 
IMG OID639703762 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_847099 
Protein GI116750412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.478455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.64702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAA AATCCTTTCG AGTTGCAGTG GTGGGCGCCA CCGGCGCGGT TGGAAACCTG 
ATGATCCAGG TCCTGGAGGA GCGCTCCTTT CCGGTAGGTG AGCTCAAGCT GCTCGCGTCG
GCGCGGTCCA TCGGAAAGAG CCTGCCTTAC AAGGGCCGAA TGCTGCCGGT CGAGGAGCTC
ACCGAGAAGT CGTTCCGGGG GGTTCAACTG GCCTTGTTTT CGGCGGGTTC GGGCGTGAGC
AGGAAGTTCG CCCCCATCGC TGCGGAAGCG GGTTGCGTGG TGGTTGACAA TTCCAGCGCA
TTCCGCATGG ATCCCCGGAT TCCGCTGGTG GTCCCGGAGG TCAACGCTCA TGCCCTGGGC
GACCATCCGA CGATCATTGC CAATCCCAAC TGTTCGACCA TCCAGATGGT CGTTGCGCTG
AAACCCATTC AGGATGCGGT CGGGATCAGG CGCATCGTCG TGACCACGTT CCAGGCCGTT
TCGGGCACCG GAAAGCGGGC CATCGAAGAG TTGCGCAGGC AGGTGGCGGA CCTGAGCGAG
GGCAGGGAAG TCACCAGGGA GGTCTACCCC CACCAGATCG CTTTCAACTG TTTCCCGCAC
ATAGGGGCCT TTCTCGACAA CGGGTTCACC GAAGAAGAGA TGAAAATGGT CAACGAGACG
CGCAAGATCT TCGAAGACCC CGAAATTCAG GTCTGTGCGA CGACGGTGAG AGTGCCGGTG
TACTTCGGTC ATTCCGAATC CGTCAATATC GAGACGAGGG CCCCGATTTC GGCGGAGCGC
GTCCGGGAAA TCCTGTCCGG GGCTCCCGGC GTAATCGTCG TGGACGACCC GGGGCAGCAC
CGGTACCCGG TCCCGCTGCA GGCGGCCGGC ACGGACGACA CCCTGGTGGG CAGAATCCGA
ATGGATCCAT CGGTGGAAAA CGGGCTGGCC ATGTGGGTGG TGGCGGACAA TATCCGCAAG
GGAGCCGCAA GCAATGCCGT CCAGATTGCC GAAATACTCG CGGCGCGGAA CCTGATCTGA
 
Protein sequence
MAEKSFRVAV VGATGAVGNL MIQVLEERSF PVGELKLLAS ARSIGKSLPY KGRMLPVEEL 
TEKSFRGVQL ALFSAGSGVS RKFAPIAAEA GCVVVDNSSA FRMDPRIPLV VPEVNAHALG
DHPTIIANPN CSTIQMVVAL KPIQDAVGIR RIVVTTFQAV SGTGKRAIEE LRRQVADLSE
GREVTREVYP HQIAFNCFPH IGAFLDNGFT EEEMKMVNET RKIFEDPEIQ VCATTVRVPV
YFGHSESVNI ETRAPISAER VREILSGAPG VIVVDDPGQH RYPVPLQAAG TDDTLVGRIR
MDPSVENGLA MWVVADNIRK GAASNAVQIA EILAARNLI