Gene Sfum_2951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2951 
Symbol 
ID4458711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3642220 
End bp3642732 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content58% 
IMG OID639703723 
Producthydrogenase expression/formation protein 
Protein accessionYP_847060 
Protein GI116750373 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.585714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA AGCGGATTTT GGTCCTGGGG GTGGGCAACG TTCTTCTCAA GGATGAGGGT 
GTTGGAGTCA AGGTCATCGA GACGCTTGGC TCCGAATACG CTTTTTCGTC CAACGTCGAA
CTGATGGACG GCGGCACCCT TGGACTGCGG CTTCTCGACC CCATTTGCGA CGCGGACTTT
CTGATCGTTG TGGATGCGGT CCTGAACGGA GGGACTCCCG GCACGCTCTA CCGCCTCCCG
GTGAGCGAAA TCGAAAAGCG GGTCACGTTC AAGAATTCGC TCCACCAGCT GGATCTTGTC
GAAACTCTGG CCTACGCGGA AATCCTGGGC AGACGGCCGG ACGCCGTCAT CATCGGAGTC
GAACCGGAGG ACATTTCGCC CTGGGGGCTG GAGATGACGG ATGTGGTGAA GGCCGCGTTC
CGGGAGATTT GTTCGAAGGT GCTCGAGGAA ATCGAACGGG CGGGGGGCTC CTTTCGAAGA
ATCAATCCGG ATGACTTGTC TTCCGTGAAA TGA
 
Protein sequence
MSEKRILVLG VGNVLLKDEG VGVKVIETLG SEYAFSSNVE LMDGGTLGLR LLDPICDADF 
LIVVDAVLNG GTPGTLYRLP VSEIEKRVTF KNSLHQLDLV ETLAYAEILG RRPDAVIIGV
EPEDISPWGL EMTDVVKAAF REICSKVLEE IERAGGSFRR INPDDLSSVK