Gene Sfum_2826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2826 
Symbol 
ID4458857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3484754 
End bp3485233 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content56% 
IMG OID639703600 
ProductCRISPR-associated Cse2 family protein 
Protein accessionYP_846939 
Protein GI116750252 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAGCG GAGAAAATCC TTTTGTCGCC TATCTTGAAC GGCTGCGCGA CGAAAATGAC 
AGAGCTGCTC TGGCAAAGCT TCGCCGAGGG CTCGGCAAGA AGATGGGAAC TCCGGAGATG
TACCCCTTCG TCGTGCCGTT CATGCCTGAC GACCGAAGGG TGCGGGAGCA CTACTTCCTC
GTGGCATCCC TGTTCGCATC CCATCCTGAC CCGGCCCCGA TCGAGCGAAG TATGGGCGGC
GTTTTCAAGG CCATACTGGG AAAAACGGAG AGCGACAGCA TCGAAAAGCG ATTCGTTCAA
TTGCTGTCCG CGGACATCGA GGATGTGGGC AAATACCTTC GCCATGCGAT TTCCCTTGCC
CGGAGCAAGG GAGTGGCCGT CAATTACCAC CGTTTGCTGA GCGACCTCAG GTACTGGGAG
CATAGGGACA GGTTCGTCCA ACTTCAGTGG GCAAGAGATT TCTGGGGTTT CCAGAAGTAG
 
Protein sequence
MKSGENPFVA YLERLRDEND RAALAKLRRG LGKKMGTPEM YPFVVPFMPD DRRVREHYFL 
VASLFASHPD PAPIERSMGG VFKAILGKTE SDSIEKRFVQ LLSADIEDVG KYLRHAISLA
RSKGVAVNYH RLLSDLRYWE HRDRFVQLQW ARDFWGFQK