| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2824 |
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| Symbol | |
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| ID | 4458855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3480615 |
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| End bp | 3483179 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639703598 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_846937 |
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| Protein GI | 116750250 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAG AAGACGTTTT TCGGTTCTGG GGCAAGACCT CGGGCAATGT CGTGCACCCA
GCCGTCTGTC ACATGCTGGA TACGGGAATC GTCGCGTGCG AATTGCTCAT GGTCCAGCCT
CATGGATTCA TATCCAAGCT GGCCGATGAA TTCGGGATCA CAACGGATGC ATTGCCTCAA
CTTGCGGCAT TTCTGGCGGC GTTGCACGAC ATAGGAAAGA TCAGCCCGGG ATTTCAGGCT
AAGCGGCCGG ATCTCAGCGC ACCCTTGAAG CTTGAGGGCT ACGTGTTTTC CCGAGCTGAT
GAGGACAGGC ACACCTTGTC CACCCTGGAG ACCCTGCCTG ACCTTCTGAT CGACTGTCTG
CAGTGCGAAG ACAGCCTGGC AATCGCGCTA TCGCGGGCTC TTGCCGCACA CCATGGAGTC
TTTACGGGAC AAGAGGCTCA AAAGGTCGGT GCGGGCAAGT GGATTAAGGC GAGGCGGGCT
GCGCTCGAAT TTCTCTCCCG CCTGTTCTGG GACAAGAGCT TGACTGGTCT GGGCTTTCCT
TCCACCCCCG CACTCGTTAT TCTCGCAGGT CTTGTGAGCG TTTCCGACTG GCTTTCATCC
GCGGAGGAGA ATTTTCCTTA CCTGACCTGC CCACGGCCCG ACCTCCGGGA GTATGTGGCC
GATCGCACAC AAAAAGCAAG AGAGCTTGTA AGCAGGCTTC GTTTTGACGT CTCTTCTCCC
GCAGCAACGG AATTTCACCA GCTTTTCGAT TTCACGAGCC CCAATCCCAG CCAGACCGTA
ACACTCCAGA CGGTGAACGA ATTGCACCAC CCGATGCTCG TCGTGATTGA GAGCCCCATG
GGAAGCGGCA AGACCGAAGC CGCACAAGCA GTCTATGCTC ACCTCTCGTG TGAAGCCGGG
CTGCGCGGCA TGTACTACGC CTTGCCTACT CAAGCCACCG GAAACGCCAT GCTGCCCCGC
ACGGCAAGAT TCTTGACGAG GCTTGGTCTT GAGACCGGAA CCGAGCTTCA TCTGCTCCAT
ACCAACGCCG ATCTGAATCA GGACTACGAG AGGCTGCGCA TCTCCAGCCT CAATGCGGAA
CCTGGGGACG TATCCGCCTC CTCCTGGTTC ACAGCCCGAA AACGGGGACT GCTTGCGGCC
CACGGAGTCG GAACTCTGGA CCAGGCGCTT CTTGCGGCCC TCAAGGTGAG GCACTTTTTC
GTACGGCTTT TCGGCCTTGC CGGCAAGCTC CTTGTCCTCG ACGAGGTACA CGCCTACGAT
GCATACATGG TCGAGGAGAT CTACCGACTC ATTGGCTGGC TGGCCCACTG CCACACTTCT
GTCGTGCTCC TGTCGGCGAC TCTTCCCAAG GCGCGGCGCA AGAAGCTGAT TCAAGCCTTT
CGACCGGAGG TCGAAGTTCC GGACGACATC CGTTATCCAT GCGTAACGGG CGTCGACATT
TCGGGTGCAT TCGCGGCGCA TCCCATCGAG GGGCTGAAGC CGGACACAAT CTATGTGGAA
CCGGTGATTG CCGAGTCCAC GGACAAACCT GCCCGCATCC TGTCACTGCT CCTGGAAAAG
CTCGCTGACG GTGGCTGTGC CGCTTGCATC ATGAACACGG TGGGAGAGGC GCAAGATCTG
CATGAATTGC TGCGGCACCA CTTCCCCGCC GATGAAGTGC TTCTCTTCCA CTCGAGGTTT
ACGTTGGAAA GAAAGCTCCG GATCGAGCAC GACATCCTGT CGCGCTACGC GAGTGACGGA
AAAAGGCCGC ATCGCGGGAT CGTCATAGCC ACTCAGGTTA TCGAACAGAG CCTCGATGTG
GATTTCGACC TGATGATCAC CGACCTTGCC CCCATCGACC TTTTGCTCCA GCGTGCCGGC
CGCCTCCACC GCCACGAGCG TGCACGACCT CAGCTTCTCC GCCCGAGGAA TTTATGGGTG
CTCATGCCCG AGTTTCGGTC TCGTCTCCCT GATTTCGGCG GCAGCGAATA TGTCTATACA
CCGGATATTC TTCTAAAAAC AGCACTCCTC TTTTCTGCCG AGGAGGACTT GAGCCATCTT
GAGGTATCAA TCCCCACCGG CGTAAGTGCG CTGATCGAAT GCGTCTACGG AGATGATTTC
CCGCCCGAGG TACCGGAACA TCTTCTGGGT CCCATGCGCG GATGGGAGGC AAAGCGCCTC
GGGGATGAGA CCTCGCAGAC GTTCTTTGCC GCCTGCAGCG CGCTCATAGA GGCGAAGGCA
TGTCTTCGGG ACCCGGACTA CCTGGGACAA ATATCGATGG ACAATGACGA CGACTGTGCG
ATCGTCACCC GTCTGACCAG ACCCAATGTC ATGCTTGTGG TCGTCGAAAA CGGACGATGT
CTCACGGTCG CTGACAAAGC TGAGGAACGC AAGCTCTTCT CATCGACTGT CGCAACGGAT
AACACGGCAA TCGTAAAGCA TTTTCTGGCC AAGGAACCAC CCGGGGAGTG GGCGGACTCG
CCATTGCTTC GCCACTGCCG GCCGCTTTTC GTTTCAGGCG GGAAGTCCGT GGAGAGACCC
GATCTCAGCT ATGACGACGA ATTCGGTTTG CGCTTTGCCC GTTAG
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| Protein sequence | MTEEDVFRFW GKTSGNVVHP AVCHMLDTGI VACELLMVQP HGFISKLADE FGITTDALPQ
LAAFLAALHD IGKISPGFQA KRPDLSAPLK LEGYVFSRAD EDRHTLSTLE TLPDLLIDCL
QCEDSLAIAL SRALAAHHGV FTGQEAQKVG AGKWIKARRA ALEFLSRLFW DKSLTGLGFP
STPALVILAG LVSVSDWLSS AEENFPYLTC PRPDLREYVA DRTQKARELV SRLRFDVSSP
AATEFHQLFD FTSPNPSQTV TLQTVNELHH PMLVVIESPM GSGKTEAAQA VYAHLSCEAG
LRGMYYALPT QATGNAMLPR TARFLTRLGL ETGTELHLLH TNADLNQDYE RLRISSLNAE
PGDVSASSWF TARKRGLLAA HGVGTLDQAL LAALKVRHFF VRLFGLAGKL LVLDEVHAYD
AYMVEEIYRL IGWLAHCHTS VVLLSATLPK ARRKKLIQAF RPEVEVPDDI RYPCVTGVDI
SGAFAAHPIE GLKPDTIYVE PVIAESTDKP ARILSLLLEK LADGGCAACI MNTVGEAQDL
HELLRHHFPA DEVLLFHSRF TLERKLRIEH DILSRYASDG KRPHRGIVIA TQVIEQSLDV
DFDLMITDLA PIDLLLQRAG RLHRHERARP QLLRPRNLWV LMPEFRSRLP DFGGSEYVYT
PDILLKTALL FSAEEDLSHL EVSIPTGVSA LIECVYGDDF PPEVPEHLLG PMRGWEAKRL
GDETSQTFFA ACSALIEAKA CLRDPDYLGQ ISMDNDDDCA IVTRLTRPNV MLVVVENGRC
LTVADKAEER KLFSSTVATD NTAIVKHFLA KEPPGEWADS PLLRHCRPLF VSGGKSVERP
DLSYDDEFGL RFAR
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