Gene Sfum_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2804 
Symbol 
ID4458869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3455324 
End bp3455992 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content56% 
IMG OID639703578 
Productpeptidase, zinc-dependent 
Protein accessionYP_846917 
Protein GI116750230 
COG category[R] General function prediction only 
COG ID[COG1913] Predicted Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGTGT CCCTGGAGGT CATTCGACGT GATTTCTCGG AATATGGCCT GCAATACCGC 
AAACAACCGA GCCTGTTTTT CACTGCAACC CACATGCTTT CACGAAAACC GATACGCAGA
AACGAGCCCT CCGCCGGATT GATCGCCATG GGACGTGTTT CGGCTGCGGA ACTCCGAGTC
ATAGCAGCCA ACATCCAGGC CGTGATGAAT CTTCCGGTTG AGCTGCTTGC GCCCATGGCG
ATCCCCGAAG AGGCCTTTCA ACCCCATCGG AGTCAGTACG ATGCGGGCCT GATCCTGAAG
CGGCTCGCTC AATTGCCCTT TCCACATCAA CGTTGCGTTC TCACGGTCAC AGACGTGGAT
CTTTGCACGC CGATACTGAC CTACGTGTTC GGGGAGGCGG AAATGGGACA AAAAAGAGCC
ATCGTATCCG GTTTCCGGCT AACGGATGGA CCGGATGGGT TTCCCGCTCC GGCGGACGTC
TACTATGAAC GCCTGGTGAA GATCGCTTTG CACGAGATCG CGCATACTCT GTCCCTGTAT
CATTGTGAAG CGCCGAAGTG TCTCATGCGA TTCAGCCCCA AAGTCCAGGA CCTGGATGCG
CTGGACATCT CCTTTTGCAG GCGGTGCGGT TTTGCCCTTC ACCGCACGCT GAGGAAACGC
CTTGGGTAA
 
Protein sequence
MEVSLEVIRR DFSEYGLQYR KQPSLFFTAT HMLSRKPIRR NEPSAGLIAM GRVSAAELRV 
IAANIQAVMN LPVELLAPMA IPEEAFQPHR SQYDAGLILK RLAQLPFPHQ RCVLTVTDVD
LCTPILTYVF GEAEMGQKRA IVSGFRLTDG PDGFPAPADV YYERLVKIAL HEIAHTLSLY
HCEAPKCLMR FSPKVQDLDA LDISFCRRCG FALHRTLRKR LG