Gene Sfum_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2790 
Symbol 
ID4458886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3440455 
End bp3440787 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content60% 
IMG OID639703563 
Producthypothetical protein 
Protein accessionYP_846903 
Protein GI116750216 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00558888 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATGA GCAGAGGATT CAACCCCATG CAGCAGGTCA AGGCCTTGCA GGACAAGATG 
GCCAGGATGC AGGAAGAGCT GGCTCTCAAG ACCGTGGAGG CTTCGGCCGG AGGGGGCATG
GTCGCTGTGG TCGTGAACGG CCGGCAGGAA GTGCTGAGCG TGAAGGTCGA TCGCCAGGTG
GTCGACCCGG AAGATATAGA AATGTTGCAG GACCTGATTG TCGCCGCGGT GAACGACGGA
TTGCGCAAGT CCCAGGAAAT GGCCGCTCAG GAAATGGGCA AGATCGCGGG CGGCTTGAAC
ATCCCGGGCC TGAAGATTCC CGGGTTGTTC TGA
 
Protein sequence
MVMSRGFNPM QQVKALQDKM ARMQEELALK TVEASAGGGM VAVVVNGRQE VLSVKVDRQV 
VDPEDIEMLQ DLIVAAVNDG LRKSQEMAAQ EMGKIAGGLN IPGLKIPGLF