Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2789 |
Symbol | |
ID | 4458885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3438514 |
End bp | 3440322 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639703562 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_846902 |
Protein GI | 116750215 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.226663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACC TCGTGATTGC ACGAAAATGG CGACCGCAGA CTTTTGAGGA AGTGGTCGGC CAGCCTCATG TCACCCGGAC TTTGCAGAAC GCGATCCGCT CCAGCCGCAT CGCCCATTCA TACCTGTTCA CCGGGGCTCG CGGCGTCGGC AAGACCTCCA TCGCCCGCAT TCTGGCCAAG GCGCTCAATT GCGAAACGGG GGTCACGCCC ACGCCGTGCA ACGTCTGTTC CAACTGCACC GAAATCCGCC AGGGAAACGC GGTCGACGTG CTCGAGATCG ACGGCGCGTC CAACCGCGGC ATCGACAGCG TCCGGGAGCT TCGGGAAACC GTGCGCTACC GGCCCGCGAA GAGTCGCTAC AAGGTGTACA TCATCGACGA AGTGCACATG CTCACCACGG AGGCCTTCAA TGCGCTTCTG AAGACGCTCG AGGAGCCTCC CGAGCACGTG GTCTTCATCT TCGCCACCAC CGAACCGCAC AAGATTCCCG CGACCATCCT GAGCCGCTGT CAGCGGTTCG ACTTCCGTCG CATTCCCTCT CACATGCTGG TGGATCACCT GAGGCACATC GCCGCGCAGG AGGACGTCGC GCTGTCCGAA GGCGTATTGT ACGCCATCGC CCGGGAGGCA GACGGCAGCA TGCGGGACGC CCAGAGCCTG CTCGAACAGA TGCTGTCCTT CAGCAGGGAC GGCTTGAGCG ACGAGGAGGT CCTGGACGTC CTGGGGGTCA TCGACCGGCG GAGCATCCAC AGGACCGGGA CGGCGGTGCT CGAGGGGGAC GTGCGGACCT GTCTCGACGT GGTGGAGGAC ATCTACCGGC GCGGCATGGA CATCAGGAGG TTCTGCCGGC AGCTGTGCGA TTACTTTCGC AATCTGCTCG TGGTTGCCTT CGGGGAGGGC GACTCGCGGC GGCTGGACCT GCCCTCGGAT GAGAAGCAAC TGCTGGCCGA GGCGGCCGGC AAGACGACGC CCGAATCTTT GTATCTCTAT TTCCAGACCG TGCTGAAAAG CGAAGAGGAG ATCCGCCGAT CCACCATCCC CCGGATAGCG CTCGAGATGC TGTTGCTGCG CCTGGCCAGG CTGCCGCGCC TCGAGTCACT GCAGGGGGTG CTCGACAAGA TTTCCGCGCT GGAACAGGGC TTGAAGGGTG CAACCACCGG AGGGGGCGGG AGCTCGGCGG CGGTCCGCGA CACGCGGCCT CCCGCGCGGG AGGCGGCCCG GGCCGCGCCG CCTCCGATGA GAGAGCCCCC CCCGCCCGGG ACCGGGGCTT CGCACTCGAG CGCCGGCACC GGGCGTGATG CACCCGATCC GATCGTGCCC GAACCGGCGA CCGGAGGCGA AACCATCCCC GACCTGCCGC GGATCGAAGG GGAGGCCGTG CCGTTGGAGG ACTTGAGCGG CCGGTGGCCG GCATTTCTCA AGTGGCTTGA GCTCAAGGAA CCGATCCTGG CGGCGAAACT GGCGCGCAGC CGGATCGGAT CGGCCGCCGC GGACTCGGTG GAGCTGGAAG TCGTCGAGGT CTTCGAGGAA CAGCTCCGGG AGCCTCAAAC CGTCGCCAGG ATCGGGGACG CCGCCGAGGC GTTCTTTCGA AGACGTTGTG CGTGGACGAT CCGGAAAAAG CCGGAAGGGA CCGGCCGCGG GGACACTCAA AGGGAAAAGA AGAAAAAGGC CTTGTCCAAA CGGCTGGTCA TGGAACACCC GGTGGTCCTG CAGGCGCTGG AAATCCTCGG GGGAGAACTG GTGGACATCC GGCGTCCGAA AACGGAGCGT GGCGAGCCGC GCTCAAGCCG GTCGAAGGCC GGGGAATGA
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Protein sequence | MSYLVIARKW RPQTFEEVVG QPHVTRTLQN AIRSSRIAHS YLFTGARGVG KTSIARILAK ALNCETGVTP TPCNVCSNCT EIRQGNAVDV LEIDGASNRG IDSVRELRET VRYRPAKSRY KVYIIDEVHM LTTEAFNALL KTLEEPPEHV VFIFATTEPH KIPATILSRC QRFDFRRIPS HMLVDHLRHI AAQEDVALSE GVLYAIAREA DGSMRDAQSL LEQMLSFSRD GLSDEEVLDV LGVIDRRSIH RTGTAVLEGD VRTCLDVVED IYRRGMDIRR FCRQLCDYFR NLLVVAFGEG DSRRLDLPSD EKQLLAEAAG KTTPESLYLY FQTVLKSEEE IRRSTIPRIA LEMLLLRLAR LPRLESLQGV LDKISALEQG LKGATTGGGG SSAAVRDTRP PAREAARAAP PPMREPPPPG TGASHSSAGT GRDAPDPIVP EPATGGETIP DLPRIEGEAV PLEDLSGRWP AFLKWLELKE PILAAKLARS RIGSAAADSV ELEVVEVFEE QLREPQTVAR IGDAAEAFFR RRCAWTIRKK PEGTGRGDTQ REKKKKALSK RLVMEHPVVL QALEILGGEL VDIRRPKTER GEPRSSRSKA GE
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