| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2752 |
|---|
| Symbol | |
|---|
| ID | 4458911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3397428 |
|---|
| End bp | 3398492 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639703523 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
|---|
| Protein accession | YP_846865 |
|---|
| Protein GI | 116750178 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATGG CGGATGCGTT GATTTCTCCG GCTGTCGGCG GCGCGATGTG GATCGCCTCG
GCGGGTCTCA CCGTCTATAG CGCAAGAAAG CTCAAGGAAG ACATCCACGA GAACAGGGTC
CCTCTCATGG GAGTCCTCGG GGCTTTCGTT TTCGCCGCCC AGATGATCAA CTTCACAATT
CCGGCCACCG GTTCCAGCGG CCATCTGGGA GGCGGCATGA TCCTGGCGAT CCTGCTCGGA
CCGTACGCAG CCTTTCTCTC CATGGCGTCC ATACTCACCG TTCAGGCCTT GTTTTTCGCA
GACGGCGGCC TGCTCGCCCT GGGATGCAAC ATATTCAATC TCGGCTTCTT CCCCTGTTTC
ATCGCCTACC CTCTCATTTA CAGGAAGATC GCCGGAGCGG AGCCGACTCA GCGCCGCATC
CTTGCAGGGA CACTTCTTTC CGCCGTGATC GGGCTCCAGT TGGGAGCCTT GGGAGTGGTT
CTCGAAACGC TGTTTTCCGG GGTCTCGGAA TTGCCGTTCG GCACGTTCCT GCTCCTGATG
CAGCCCATCC ATCTCGCCAT AGGAATCGTT GAGGGGTTTG TAACCGCGGC CGTCGTCACC
TTCGTGTGGA AGGCACGTCC CGAAATCCTG CAATTGAGCG CATCTTCCCC CGCGCCGGCA
GGCAGGTCCT TCAGGGGAGT CCTCGCGACT CTGATCGCGC TCACCGTCCT GACGGGCGGC
ATCCTCTCCT GGTTTGCTTC AGCCAATCCG GACGGATTGG AATGGGCCAT GTTCCGCACC
GCGGGCAAGG AAGAGCTCGA GGCCCCTCAG GGAGGAGTAC ACTCGCTGCT GGCCGGCCTC
CAGGAGCGGA CTTCTTTCCT GCCCGACTAC GGCTTCGCGA AACCGGAAAA GACGGAGCCG
TCAAAGGAAG GCAGCGGAGA GGCTCACGGA ACACCAGCAG AGGAGGAACC CTGGCCCGCC
GTCAGTGCCG GGACCTCCTT TTCCGGCCTC ATTGGAGGAG CTCTGACCAT GCTCCTGGCC
GGTTTGATCG GATTCATCCT TAGAAGATTC CAACCGAGGG GCTGA
|
|---|
| Protein sequence | MHMADALISP AVGGAMWIAS AGLTVYSARK LKEDIHENRV PLMGVLGAFV FAAQMINFTI
PATGSSGHLG GGMILAILLG PYAAFLSMAS ILTVQALFFA DGGLLALGCN IFNLGFFPCF
IAYPLIYRKI AGAEPTQRRI LAGTLLSAVI GLQLGALGVV LETLFSGVSE LPFGTFLLLM
QPIHLAIGIV EGFVTAAVVT FVWKARPEIL QLSASSPAPA GRSFRGVLAT LIALTVLTGG
ILSWFASANP DGLEWAMFRT AGKEELEAPQ GGVHSLLAGL QERTSFLPDY GFAKPEKTEP
SKEGSGEAHG TPAEEEPWPA VSAGTSFSGL IGGALTMLLA GLIGFILRRF QPRG
|
|---|
| |