Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2737 |
Symbol | panB |
ID | 4458931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3379296 |
End bp | 3380144 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639703508 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_846850 |
Protein GI | 116750163 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATC GAGTGACTGT TCCCGAGATC ATTGCTTCCA AAGGCAAACG CAAACTCTCC GAACTGACTG CGTACGACTA TCCCACTGCC CTGTGGGCGG ATCAGAGCGG CATCGACATG CTGCTCGTCG GCGACTCCCT GGCCATGGTC GTTCTGGGCC ACGACGATAC CCTTTCGGTG GGAATGACCG AAATGCTCCA CCACACGAGT GCGGTCGCCC GCGGCGCAAA GCGCGCCCTG GTGATCGGCG ACATGCCGTT CATGTCTTAC CAGGTCAGTG TGGAGGAAGC CCTGTACAAC GCGGGTCTTT TTCTGAAAGA AGCGAAGGCC CAGGCGGTCA AGCTTGAAGG CGGGAGGAGA GTGGCGCCCC AGGTGAAGGC CATGGTTGAA GCCGGTATCC CGGTGCAGGG CCACCTCGGG CTCACGCCGC AGAGCTCCGC CCAGTTCGGC GGTTTCAAGA TTCAGGGAAA GACGGCCGAA GCGGCCAAGA TTCTCATCGA AGACGCACAG ATCCTTGCCG AGGCAGGATG TTTCAGCATC GTTCTGGAAG GCATTCCCTC CAATGTTGCC GCCATGGTCA CGGAAGCCAT ACCCGTACCC ACCATCGGCA TCGGTGCGGG ACCCGATTGC GACGGCCAGG TCCTGGTGAT CCATGATGTG CTCGGTTTGT ATGACCGCTT CGTGCCCAAA TTCGTCAAGA AGTATGCCCA ACTTGGCTTG ACGATCAAAG AGGCGTTGAC AAAATACCGC GAAGAAGTGG AAAACGGGAC GTTTCCGGGC CCCGAACACG AATTCGGCAT GGCCGAACTG GAAGCGAAAA AACTGAGCGG ACTGGAAGAC AAGAAATAG
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Protein sequence | MKNRVTVPEI IASKGKRKLS ELTAYDYPTA LWADQSGIDM LLVGDSLAMV VLGHDDTLSV GMTEMLHHTS AVARGAKRAL VIGDMPFMSY QVSVEEALYN AGLFLKEAKA QAVKLEGGRR VAPQVKAMVE AGIPVQGHLG LTPQSSAQFG GFKIQGKTAE AAKILIEDAQ ILAEAGCFSI VLEGIPSNVA AMVTEAIPVP TIGIGAGPDC DGQVLVIHDV LGLYDRFVPK FVKKYAQLGL TIKEALTKYR EEVENGTFPG PEHEFGMAEL EAKKLSGLED KK
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