Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2722 |
Symbol | |
ID | 4458951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3363657 |
End bp | 3364361 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639703493 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_846835 |
Protein GI | 116750148 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.917223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTAG CACATTCCCT GATTTGCGGC TGTCTCATGA GGGAATCCAC GGAAGACACG GCTCGTTTTC TCGAGTATCC GGGGATCGGC CTTGTGGAAT GGCGACTCGA CGCCCTGCAC GGCATCCACA CCCGCAATGG ACTGGACGAG GCTCTTGCCG GGCTGTCCCT GCCCGGGCGT CACCCGGTGA TTGCGACCGT CAGGCCTGAA AGGTTCCGGG GAGGATTCCG CGGCACCGAG GAGGCTCGTA TCCGGGCGCT CGAGAGGACC GTTCGGGCCG GAGCGGAATG GATCGACCTC GAAGACGATC TGCCCGAAGA CGTATTGTCC CCGTTTCGTG ATTCCGCGGC GAGGGTCGTG ATTTCTCACC ACGATTTCGA TGGGACCCCG GCTTCCGATC CCCTCAAACA CCGGGTGGAA CACCTGGCAA CGCTCGGGGC GCATGTTCTC AAGATCGCCA CCTATGCCCG CACCGTTGAA GACAACCTCC GCGTTCTGGA GCTCATCCCT TTTGCCCGCA AGCAGTTCGG CGCGGAGACG ATCGCGTTTT GCATGGGGCC CACGGGCCGC TGGAGCAGGC TCGCCTGCCT GTTGATGGGA AGTCCCTGGA CGTATGTCCG GTTCCCGGAA CTTCCCGCAT CTGCGCCGGG GCAATTCACC GTGGCCCAAA TGCAGACCCT GCTCGAGATT GTCGGAGCGG GGTGA
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Protein sequence | MSLAHSLICG CLMRESTEDT ARFLEYPGIG LVEWRLDALH GIHTRNGLDE ALAGLSLPGR HPVIATVRPE RFRGGFRGTE EARIRALERT VRAGAEWIDL EDDLPEDVLS PFRDSAARVV ISHHDFDGTP ASDPLKHRVE HLATLGAHVL KIATYARTVE DNLRVLELIP FARKQFGAET IAFCMGPTGR WSRLACLLMG SPWTYVRFPE LPASAPGQFT VAQMQTLLEI VGAG
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