Gene Sfum_2722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2722 
Symbol 
ID4458951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3363657 
End bp3364361 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content63% 
IMG OID639703493 
Product3-dehydroquinate dehydratase 
Protein accessionYP_846835 
Protein GI116750148 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0710] 3-dehydroquinate dehydratase 
TIGRFAM ID[TIGR01093] 3-dehydroquinate dehydratase, type I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.917223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTAG CACATTCCCT GATTTGCGGC TGTCTCATGA GGGAATCCAC GGAAGACACG 
GCTCGTTTTC TCGAGTATCC GGGGATCGGC CTTGTGGAAT GGCGACTCGA CGCCCTGCAC
GGCATCCACA CCCGCAATGG ACTGGACGAG GCTCTTGCCG GGCTGTCCCT GCCCGGGCGT
CACCCGGTGA TTGCGACCGT CAGGCCTGAA AGGTTCCGGG GAGGATTCCG CGGCACCGAG
GAGGCTCGTA TCCGGGCGCT CGAGAGGACC GTTCGGGCCG GAGCGGAATG GATCGACCTC
GAAGACGATC TGCCCGAAGA CGTATTGTCC CCGTTTCGTG ATTCCGCGGC GAGGGTCGTG
ATTTCTCACC ACGATTTCGA TGGGACCCCG GCTTCCGATC CCCTCAAACA CCGGGTGGAA
CACCTGGCAA CGCTCGGGGC GCATGTTCTC AAGATCGCCA CCTATGCCCG CACCGTTGAA
GACAACCTCC GCGTTCTGGA GCTCATCCCT TTTGCCCGCA AGCAGTTCGG CGCGGAGACG
ATCGCGTTTT GCATGGGGCC CACGGGCCGC TGGAGCAGGC TCGCCTGCCT GTTGATGGGA
AGTCCCTGGA CGTATGTCCG GTTCCCGGAA CTTCCCGCAT CTGCGCCGGG GCAATTCACC
GTGGCCCAAA TGCAGACCCT GCTCGAGATT GTCGGAGCGG GGTGA
 
Protein sequence
MSLAHSLICG CLMRESTEDT ARFLEYPGIG LVEWRLDALH GIHTRNGLDE ALAGLSLPGR 
HPVIATVRPE RFRGGFRGTE EARIRALERT VRAGAEWIDL EDDLPEDVLS PFRDSAARVV
ISHHDFDGTP ASDPLKHRVE HLATLGAHVL KIATYARTVE DNLRVLELIP FARKQFGAET
IAFCMGPTGR WSRLACLLMG SPWTYVRFPE LPASAPGQFT VAQMQTLLEI VGAG